Solanum dulcamara (climbing nightshade): 129881078
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Entry
129881078 CDS
T09577
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3-like
KO
K03265
peptide chain release factor subunit 1
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129881078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdul03019
]
129881078
03012 Translation factors [BR:
sdul03012
]
129881078
Messenger RNA biogenesis [BR:
sdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
129881078
Translation factors [BR:
sdul03012
]
Eukaryotic type
Release factors
129881078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Motif
Other DBs
NCBI-GeneID:
129881078
NCBI-ProteinID:
XP_055811385
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Position
2:81835926..81840317
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AA seq
437 aa
AA seq
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MADGQENDKNIEIWKMKKLIKALQSARGNGTSMISLIIPPGDQISRITRMLAEEYGTASN
IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLLLYTGTIVTDDGKEKKVTFDLTPFKPIN
ASLYLCDNKFHTEPLGELLESDEKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQS
DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILANVKFIQEKRLIGKFFEEISQDTG
KYVFGVDDTIKGLEMGAVETLIVWENLDISRYVLKNSVTNEIVIKHLTKEQEADNSNFKD
PATSAELEVQDKMPLLEWFANEYKTFGCSLEFVTNRSQEGSQFCRGFGGIGGILRYQLDM
RSFDEPSDEGEYFGDSD
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcagatggccaagaaaatgataagaatattgaaatatggaaaatgaaaaaattaatt
aaagccctacaatctgccagaggaaatggcaccagcatgatctctcttatcatcccccct
ggtgatcagatatctcgtattactaggatgctggcagaagaatatggtactgcatcaaat
attaagagcagagtaaaccgtcagtctgtgcttggtgcaataacgtctgcccagcagagg
cttaaactgtataacaaagttcctcctaatggattgcttctttatactggaactatagtg
acagatgatggaaaggaaaagaaggttacttttgatcttacaccttttaaacccataaat
gcgtctctatacttatgtgacaacaagtttcatacagaacctcttggtgaattgttggaa
tctgatgagaagtttggtttcattgtcatggatggtaatgggacccttttcgggaccttg
agtggcaacacccgagaagtacttcataagttcactgttgacctcccaaagaagcatgga
agaggaggtcaatcagctcttcgatttgctcgtcttcgaatggagaaacgtcataattat
gtgaggaagacagcagagcttgctactcaattcttcattaacccagccactagccagcca
aatgtatctggactaatacttgctgggtctgctgattttaagacagagctaagccaatct
gatatgtttgatccgcgtctacaagcaaagatacttaatgtggttgatgtgtcctatggt
ggggagaatggcttcaatcaagcaatcgagctgtctgctgagattctggcaaatgtgaag
tttatacaagaaaagcgcttgataggaaaattctttgaggaaatcagtcaagatactggt
aagtatgtattcggcgtggatgacacaataaaaggtttggagatgggagcagttgaaact
ctaattgtgtgggaaaatcttgatataagccgttacgtactgaaaaatagtgtgactaac
gagattgtcattaagcacctaaccaaggaacaagaggctgataatagtaacttcaaggat
cctgccacatcagctgaattggaggttcaggataaaatgcccctgctggagtggtttgcc
aatgaatacaaaacttttggttgttcacttgagtttgtcactaacaggtctcaagaggga
tcacagttctgcagaggatttggtggcattggaggaatccttcgctaccagcttgatatg
cgttcctttgatgagccatctgatgaaggagaatactttggggattctgattaa
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