Solanum dulcamara (climbing nightshade): 129881104
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Entry
129881104 CDS
T09577
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03015
mRNA surveillance pathway
sdul04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129881104
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
129881104
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sdul01009
]
129881104
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdul03019
]
129881104
03036 Chromosome and associated proteins [BR:
sdul03036
]
129881104
Protein phosphatases and associated proteins [BR:
sdul01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
129881104
Messenger RNA biogenesis [BR:
sdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
129881104
Chromosome and associated proteins [BR:
sdul03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
129881104
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
B56
YafT
Herpes_glycop_H
Motif
Other DBs
NCBI-GeneID:
129881104
NCBI-ProteinID:
XP_055811427
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All DBs
Position
2:complement(82114396..82121689)
Genome browser
AA seq
475 aa
AA seq
DB search
MFKIIKRGKKSSKGEAVEPPIPSSLPNAPVDHASRIATSVVASQHVTLANATPDPSVVEV
LPLLKEVALSERHVLFIRKLQICCVQFDFSDTVKCARQKEIKRQTLTELIDLVQSGSCKM
NEIMQEELVRMISTNIFRCLPPASHENTGSEGVEEEDDMYLDPSWPHLQLVYELLLRYVL
SPEMDTKVAKQFLDHSFVLKLLDLFDSEDPREREYLKTILHRIYGKFMVHRPFIRNGINN
VFYRFIFETERHNGIGELLEILGSVINGFALPMKEEHKLFLVRALIPLHKPKCVSAYHHQ
LSYCIAQFVEKDYRLADIVIRGLLKYWPITNCGKEVLFLNELEEVLEGTQPVEFQRCLVP
LFKQLGRSINSPHFQVAERALFLWNNEHIVDLIAQNRRAILPIIFEPLERNMYGHWNQAV
HGLTSNVRRMFLEMDSEFFEECEREYNEKAAGASDLVEQREQAWKKLEEAAALVG
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagataataaaaagaggaaagaaaagctcaaaaggggaggctgtggagcctccg
ataccgagctcattgcctaatgcgcctgttgatcatgcttcgaggatagcaacgtctgtt
gtggcatcacaacatgttactttggcaaatgccacaccagatcctagtgtggttgaagtt
ttgcccttattgaaggaggttgcactttctgaacgccatgttttgtttatccggaagctc
caaatttgctgtgtgcaatttgacttctcggatacggtgaagtgtgctagacagaaggag
atcaagaggcaaacactcacagagcttattgatttagttcaatcgggttcatgtaagatg
aatgaaataatgcaggaggagttggttaggatgatatctaccaatattttccggtgcctg
cctcctgcttcgcatgagaatactgggtcggaaggtgttgaggaagaggatgacatgtat
ctggatccatcgtggcctcatttgcagctagtgtatgagttacttctaaggtatgtgctg
tcgcctgaaatggataccaaggttgccaagcaatttcttgaccactcgtttgtgctgaaa
ctgctcgacttgtttgattcagaggatcctagagagcgggagtatttgaagactattctt
caccgcatatatgggaaattcatggttcataggccgtttataaggaacgggataaacaat
gtattctacaggtttatatttgagacggagaggcataacggtatcggtgaattgctagag
attcttggaagtgtaattaatggatttgctctaccaatgaaagaagagcacaagttgttt
cttgtccgggcacttattccactccacaagcctaaatgtgtttctgcatatcaccatcag
ttgtcctattgcattgctcagtttgttgagaaagattaccgattggcagatatcgtcatc
agggggctactaaaatactggccaattactaattgcggaaaggaggttctctttcttaat
gaactggaagaagtcctggaaggtacgcaacctgttgaatttcagcgctgtttggttcca
cttttcaagcaacttggacgaagcatcaatagtccccattttcaggttgctgaacgagct
ctgttcttatggaacaatgagcatatagtagacttgatcgcgcagaatcgacgtgcaatt
ttgccaatcatctttgagccattagaaaggaatatgtatggtcactggaatcaggcagtc
catgggcttacctccaatgtccggagaatgttcttggagatggattctgaatttttcgag
gagtgtgaaagggaatacaatgaaaaagcagccggtgccagcgaccttgtggagcagcgc
gagcaagcttggaaaaaattggaagaagctgctgcactggttgggtag
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