Solanum dulcamara (climbing nightshade): 129881107
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Entry
129881107 CDS
T09577
Name
(RefSeq) tRNA wybutosine-synthesizing protein 2/3/4
KO
K15450
tRNA wybutosine-synthesizing protein 3 [EC:
2.1.1.282
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdul03016
]
129881107
Enzymes [BR:
sdul01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.282 tRNAPhe 7-[(3-amino-3-carboxypropyl)-4-demethylwyosine37-N4]-methyltransferase
129881107
Transfer RNA biogenesis [BR:
sdul03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
129881107
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
TYW3
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
TRM5-TYW2_MTfase
Beta-prop_TYW4
Kelch_HCF
Kelch_2
Kelch_FKB95
TYW2_N_2
NANM
Beta-prop_Calicin
DUF6242_C
MTS
DNA_methylase
Cons_hypoth95
PrmA
Motif
Other DBs
NCBI-GeneID:
129881107
NCBI-ProteinID:
XP_055811432
LinkDB
All DBs
Position
2:complement(82152315..82159806)
Genome browser
AA seq
1039 aa
AA seq
DB search
MEFEKRKLATLSSMNSPEPDKSPKGNIDAPIIPLLNTLNSHPSYFTTSSCSGRISILSQP
TNPITNPTKKKAKGGKWVFISHDPIEPHLILSLLFPLKSTQSVTVSVTEVTDLHSLVFRF
EPLIIAVECKDIEAAQFLVSLAISSGFRESGITSVNKRVIIAIRCSIRLEVPLGDTEKIM
VSSEYVKYLVELANEKMEANRSRTDNFLDALLKNGFLGSQISNEEVDCDDSELLENSLVN
GIGGNGNAKRRDFDDSCSGSEVAPDINLHTVKLMISGESIERLYLWGHSTSTMDDVDKKK
VLIFGGFGGMGRHARRHDLLLLDLECGRMEVIDVLDAPCPRVGHTSSMIGDSMYVIGGRA
DPSNILNDVWVFNVTKKDWRLLECSGTPFLPRHRHAAAAVGSRIYVFGGIHSDMIYSSLY
VFDTQNFEWSEVQVQGDLPCARHSHSMAAYGTQIFVFGGFDGQKALGDLFSFDVKTCIWK
KEKMIGRPPSAKFSHSLFIYKKYLGIIGGCPVSQHNQRLSLLNLESHWWKHISISANGED
LFVRSTANIVDTDLIMIGGGAACYAFGTKFSEPVKINLLPLISLIESSMHLHEENMHGIC
QEEKTMGEMNISFCSPQNAMEPVTNGSFHQNAEGRDSGIVRSQVAASHWVLQLKKKDAKK
AKDMLKKFGWLDLGRKAHSQDDGKDICFPVTENFCVLFNQRNNLGDVSESVCQPEKDTCM
IALNILIECGATVLADEIVKVKKASHSPFKVMKEAVGSLLSDRGLSLQLLEELPSRWERL
GDIVVLPLTSFKDSAWDMIGQELWFMVAKSLGAIRLARQGRVAPTGTRDSTLEILVGDNG
WVNHRENGILYSFDATKCMFSWGNLSEKLRMGQFDCKDEVIVDLFAGIGYFVLPFLVRAK
AKLVYACEWNPHAVEALRHNLEANLVADRCVLLEGDNRITAPKGVADRVCLGLIPTSEGS
WVTAVRALRDVGGILHIHGNVKDSEENVWTNYVSQSIQEMARSEGHEWDVTVEHVERVKW
YAPHIRHLVADVRCKKIRT
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atggagtttgagaagagaaagttagcaactttatcttccatgaattcaccagaaccagac
aaatcaccaaaaggcaacatagatgcaccaattatccctttactcaatacccttaactca
catccttcatatttcaccaccagttcttgttctggtcgtatctccattctttcacaaccc
accaaccccataaccaaccccaccaagaaaaaagctaaaggaggcaaatgggtgttcatt
tctcacgacccaattgaaccccacttgattttatcacttctcttcccattgaaatcaact
caatcagtaaccgtaagcgtaactgaggttactgatctacatagccttgtgttcagattt
gagcctttgattattgcagtggagtgtaaggatattgaggcagctcaatttttggtttct
ttagctatttcatctgggtttagggagagtggtattactagtgttaataaaagagttatt
attgctatacgatgttccatacgattggaagttccattaggggatactgagaagataatg
gtatcttctgagtatgtaaagtatcttgttgagttagcaaatgagaagatggaggctaat
agaagtagaactgataattttcttgatgcattgttgaaaaatgggtttttgggttcacag
attagtaatgaagaagtggactgtgatgattctgaattgttggaaaattctttggttaat
ggtattggtggaaatggaaatgctaaaaggagagactttgatgattcttgctctggatct
gaagtagcccctgatatcaacctacacactgttaaattgatgatttctggtgaatcaatt
gagaggctatatctctggggtcactctacttctaccatggatgatgtggataaaaagaag
gttctcatatttggtggctttggaggaatgggaaggcatgcacgaagacatgatctattg
cttcttgatctagaatgtggaaggatggaggtgattgatgttttggatgccccgtgtcca
cgcgtgggccatacatcatccatgattggagattcaatgtatgtgattggaggaagagct
gacccttcaaatattctgaacgatgtatgggttttcaacgtgacaaagaaggattggagg
ctgttagagtgttcgggtactccattcctcccaaggcatagacatgctgcagctgctgta
ggttcaagaatttatgtatttgggggaattcacagtgatatgatatactcatcactgtat
gtcttcgacacacaaaactttgaatggagtgaagtacaagttcaaggggatttgccatgt
gcacggcattctcattcaatggcagcatatgggactcaaatatttgtatttgggggattt
gatgggcagaaggctctaggggacctgtttagttttgacgtgaaaacatgtatatggaag
aaggaaaagatgattggaagaccaccatctgcaaaattttcccattctttgtttatttat
aagaaatatctcgggataattgggggctgtcctgttagtcaacataatcagagattatca
ttactcaatctggaatctcattggtggaagcatatttctatcagtgctaatggtgaagac
ctgtttgttcgtagtacggcaaatattgttgacactgacctaataatgattggtggtggg
gcagcctgttatgcatttggaacaaagttcagtgaaccagtgaaaataaatctgttacct
ttgatatcactgatagaaagttccatgcatttacatgaagaaaatatgcatggcatttgt
caagaagaaaaaacaatgggagaaatgaacatttccttttgttccccacagaatgcaatg
gaaccggtaacaaatggaagctttcatcagaatgcagagggtagagattctggaattgtt
agaagtcaggtggccgcttctcattgggttcttcagctcaaaaagaaagatgcgaaaaag
gcaaaggatatgttaaaaaaattcggatggttagatctggggagaaaagcccattcacag
gatgatggaaaggatatttgtttccctgttacagaaaatttttgtgtgttattcaaccag
agaaataacctgggggatgtttctgaatctgtttgtcaaccagagaaagatacctgcatg
atagccttgaacattctgattgaatgtggagcaactgtactagctgatgaaattgtcaaa
gttaaaaaagcttcacattctccattcaaagtgatgaaggaagctgtaggctctctgcta
agtgaccgaggtctgtcgttgcaacttctagaggagttaccttcaagatgggaacgactt
ggtgatattgttgtgcttcctttaacatccttcaaggattcagcatgggacatgattgga
caggagctttggtttatggtcgcaaaatccctgggggctattcgccttgctcgacaaggg
cgagttgcaccaactggtacacgggacagtactttagagattcttgttggagataatggt
tgggtcaaccatcgagaaaatggaattctttattcttttgatgctactaagtgcatgttt
tcatggggtaatctctctgagaagcttcggatgggccagtttgactgcaaagatgaagtt
atagtagatttatttgctggcattggatattttgtgctacccttcctagtgagggccaaa
gccaagcttgtgtatgcttgtgaatggaatccccatgcggttgaggcacttcgtcataat
cttgaagctaatcttgttgctgaccgctgtgtcttactcgaaggagataatcgaatcaca
gcgccaaaaggtgtagctgatagagtgtgtctcggtctcattcctacaagcgagggtagt
tgggttaccgctgtcagagcattaagagacgtgggtggtatattgcacatccatgggaat
gtcaaagattctgaagaaaatgtctggacaaactatgtttcccagtcaatccaagaaatg
gctagatccgaaggtcacgaatgggacgtaacagtagaacacgtcgagagagtgaaatgg
tacgcgcctcatattcgccatcttgttgcagatgtaagatgcaaaaagattcgtacataa
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