Solanum dulcamara (climbing nightshade): 129881108
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Entry
129881108 CDS
T09577
Name
(RefSeq) vacuolar protein-sorting-associated protein 33 homolog
KO
K20182
vacuolar protein sorting-associated protein 33A
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
129881108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdul04131
]
129881108
Membrane trafficking [BR:
sdul04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
129881108
Hops complex
129881108
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Ortholog
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GFIT
Motif
Pfam:
Sec1
DUF2067
Pribosyltran
Op_neuropeptide
Motif
Other DBs
NCBI-GeneID:
129881108
NCBI-ProteinID:
XP_055811433
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Position
2:82143897..82152306
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AA seq
596 aa
AA seq
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MAQVPNLDNAPINLKSLRDQSQKELITILKNIRGKKCLVIDPKLGGSLSLIVQSSLLKEH
GAELRHLNAEPVQTDCTKVVYLVRAQLDLMKFICSHIHNDISKGIQREYFVYFVPRRAVV
CEKILEEEKIHHLLTIGEYPLYLIPLDEDILSFELDVAYKEHLVDGDTTSLWHIAKAIHK
LEFSFGLIPNVRAKGKASVRVADILNRMQSEEPVNTSEMGVPEINTIILLDREVDMITPM
CTQLTYEGLLDEFLGINNGAVELDSSIMGVQQEGKKIKVPLNSSDKLFKEIRDQNFEVVV
QVLRQKATSMKQDYTEMQTTNQTVSELKDFVKKLNSLPEMTRHINLGQHLTTFTSKPSFL
GRLDMEQTLVEAESYDICFEYIEEMIHKQEPLINVLRLLILFSITNSGLPKKNFDYLRRE
LLHSYGFEHIATLNNLEKSGLLKKQETKSNWITIKRALRLVVEDTDTANPNDISYVFSGY
APLSIRLVQHAIRSGWRPIEEILKLLPGPHSDIKRGGFSSSPSLDSLNGSLHNSDKVVDG
RRSLVLVVFIGGVTSAEISALRFLSAQEGMAYDIIVATTKIVNGSTLTETFVEKLG
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaagttccgaatttggataatgctccgataaatctgaaatcattaagagatcaa
tctcagaaagagctgattacgattttgaagaacattcgagggaagaagtgtttggtaatt
gatcctaagcttggaggttcactctcccttattgtacagagctcacttctcaaggagcat
ggggctgaattgcggcatcttaatgcggaaccagttcaaactgattgcacaaaagtagtc
tatctagtccgagcccagcttgacttgatgaagttcatttgctcacacatccataatgat
atttctaaagggattcaaagggagtattttgtttattttgtccctcgtcgtgcagttgta
tgtgagaagatacttgaggaagaaaaaattcatcatttgttgactataggcgagtatccc
ctttatttgattccactggatgaggatatattatcctttgagcttgatgttgcttacaaa
gagcacctagttgatggtgacactacctccctgtggcacatagcaaaagctatccataaa
ctcgagttttcctttggactgattccaaatgtgagggccaaagggaaagcatcagttcgt
gttgctgacattttaaatcggatgcagtcggaagaaccagtgaacacatctgagatgggt
gtgcctgaaataaatactatcatacttttggacagagaggtggatatgatcactccaatg
tgtacgcagttaacatatgaagggctgttggatgagtttcttggtatcaataatggtgct
gtggaactagattcatctattatgggtgtccagcaagaaggcaagaaaataaaggttccc
cttaattcaagtgacaaattgttcaaagagatacgggatcagaactttgaagttgttgtc
caggttctacgtcaaaaagctacttccatgaagcaagattacacagagatgcagactacg
aaccaaacagtctccgaattgaaggattttgtgaaaaagcttaactcattgccggaaatg
acaagacacataaatcttggtcagcatttaactacgtttacatccaaaccctcattcctt
ggccgacttgatatggagcaaactctcgtcgaggctgaaagctatgatatatgctttgag
tacattgaggagatgatccataagcaggaaccacttattaatgttctacgtcttctcatc
ttgttctcaataacaaattcagggttgccgaagaagaactttgactatttgagacgagaa
ctgcttcacagctatggttttgagcatatagcaaccttgaataatttggagaagtctgga
ttgcttaaaaaacaggagactaaaagcaactggataacaattaaacgtgctctgcggctt
gtagtggaggatactgatactgctaatcccaacgatatatcctatgtcttctctgggtat
gcacctctcagtattcgcctggttcaacatgcaattcgatctgggtggcgccctattgaa
gaaatattgaagttgctgccgggtccacactcagatattaagaggggtggattttccagc
agtccgtcactggactcattaaacgggtctttgcataactcggacaaagtcgttgatgga
aggcgttctttggttcttgttgttttcattggtggagtgacatctgcagagatctctgct
cttcgcttcctgagcgctcaggaagggatggcatatgacataattgtagcaactacaaaa
attgtcaacggaagcacgttgacagaaacatttgtggagaagttgggatga
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