Solanum dulcamara (climbing nightshade): 129881312
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Entry
129881312 CDS
T09577
Name
(RefSeq) vacuolar protein sorting-associated protein 35B-like
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129881312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdul04131
]
129881312
Membrane trafficking [BR:
sdul04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
129881312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
129881312
NCBI-ProteinID:
XP_055811564
LinkDB
All DBs
Position
1:complement(84713910..84730385)
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AA seq
791 aa
AA seq
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MIATEGMEDEEKWLAEGIASIQHNAFYMSRALDSDNLREALKYSALLLSELRTSKLSPHK
YYELYMRAFDELRKLEMFFREEDRHGCSVIDLYELVQHAGNILPRLYLLCTVGSVYIKSK
EAPAKDILKDLVEMCRGIQHPTRGLFLRSYLAQISRDKLPDLGSEYEGEGDTVMDAVDFV
LQNFTEMNKLWVRMQHNGPVRLKEKLEKERSELRDLVGKNLHVLSQIEGVDLEIYKDVVL
PRVLEQVVNSKDEIAQYYLMDCIIQVFPDEYHLQTLETLLGACPQLQPAVDVKTVLSRLM
ERLSNYADSSPEVLPDFLQVEAFAKLSSAIGKVIEAQVDMPVVGAISLYVSLLTFTLHVH
PDRLDYVDQILGACVKKLSGKAKLEDSKATKQVVALLSAPLEKYTDIVTVLTLSNYPRVM
DHLDAGTNKIMAQIIIESIMKNDTCVSTADKVEVLFELIKGLIKDLDGTATDELDEEDFK
EEQNSVARLIHVLYNDEPEEMLKIICTVRKHIMAGGPKRLTFTVAPLAFSALKLVRRLQG
QDGDMAGEEVPATPKKIFQLLNETIEALSTVPSAELALRLYLQCAEAANDCELEVIAYEF
FTQAFVLYEEEVADSKAQVTAIHLIIGTLQKMTVFGVENRDTLTHKATGYSAKLLKKPDQ
CRAVYACSHLFWVDDQDGSKDGERVLLCLKRSLRIANAAQQQANVTRGSSGPVTLFVEIL
NKYLYFFEKGNPQITPSAIQSLIELIKTEMQSDSTTPDKASNAFFSSTLRYVQFQKQKGG
LMGEKFGPIKV
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgatagcaacggaaggaatggaagacgaagagaaatggctagcagaaggcatcgcctct
attcaacacaacgcattctacatgtctcgtgcattggattcggataatctcagagaagca
ttgaagtattctgctttgttgctgtctgagcttcggacttcaaaactttcgccgcacaaa
tactacgagctctatatgcgagcatttgatgaattgaggaagctggagatgttcttcaga
gaagaagatagacatggttgttcagttattgacttatatgaacttgttcaacatgctgga
aatatattgcctcgattgtatctcctatgtacagtaggatctgtttacataaaatccaaa
gaggctcctgctaaggatattctcaaggatcttgttgaaatgtgtcgtggtattcaacat
cctacacgtgggctcttcctgaggagttatcttgctcaaattagcagagataaattgcca
gacctaggttctgagtatgaaggagaaggtgatactgtcatggatgctgtagattttgtg
ctgcagaacttcacagagatgaataagctttgggttagaatgcagcataatggacctgtc
aggttgaaagagaagctggaaaaagaaaggagcgaacttcgtgatctcgtcgggaagaat
ttgcacgttcttagtcagatagagggtgttgatcttgaaatctataaagacgtggttctg
cccagagtattggagcaggttgtcaattctaaggatgagattgcgcaatattatctgatg
gactgcataattcaggtctttccagatgagtaccacttgcagacacttgaaactttattg
ggtgcttgtccacaactccaacctgctgttgacgttaagactgtgctgtcacggttgatg
gagagattgtcgaactatgctgattcaagtcctgaagtgttacctgacttccttcaagtt
gaagcatttgccaagctaagcagtgccattgggaaggtcattgaagcacaagttgatatg
ccagttgttggagccatttctttgtatgtatcacttctgaccttcactctccatgttcat
cctgatcgactagactacgtggatcaaatactgggagcatgcgtcaagaaactttctggt
aaagccaagcttgaggatagtaaagcaacaaaacaagttgttgctctcttgagtgcaccc
ttggagaaatacactgacattgtgacagttctaactctttcaaattatccacgtgtcatg
gatcaccttgatgctggaacaaataagatcatggcacagataatcattgagagcatcatg
aagaatgacacctgtgtatcaactgctgacaaggtcgaggttttgtttgaattgataaaa
gggcttatcaaagacttggatggaactgctacggatgagcttgatgaggaggatttcaag
gaggaacagaattctgttgctcgccttatacacgttctgtacaacgatgagcctgaggaa
atgttaaagataatatgcactgttaggaagcatataatggctggaggtccaaagcgccta
acttttacagttgctcctcttgccttttcagcactaaagttggttaggagattgcaaggt
caggatggagatatggcgggagaagaggttccagctacaccaaagaaaatttttcagtta
ttgaatgagactatcgaggctctttctacagttccatcggcagaattggcattgaggtta
tacttgcagtgtgcagaggccgccaatgattgtgaacttgaagtgattgcttatgaattt
tttacacaagcttttgtactatatgaagaagaagttgcggattctaaagcgcaagtgact
gcaatacacttgataatcggaactcttcaaaagatgactgtgtttggtgttgagaacagg
gataccttaacacataaggccacagggtattcagcaaaactcctaaagaaacctgatcaa
tgtagagcagtttatgcttgttcacatctattttgggttgacgatcaagatggtagtaaa
gatggagaaagggtcttgctttgcctaaagcgttcgttgcggatcgctaatgcagcacag
caacaggcaaatgttacaaggggtagcagtggacctgtcactctttttgttgaaatactt
aacaagtacctttacttttttgagaaggggaaccctcaaataacaccttctgcaattcag
agccttatagagttgattaaaactgagatgcagagtgactccacaaccccagataaagct
tcaaacgctttcttctccagcacattgcgttacgttcaatttcagaaacaaaaaggaggg
ctaatgggtgagaaatttggtccaattaaggtgtga
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