Solanum dulcamara (climbing nightshade): 129881695
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Entry
129881695 CDS
T09577
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129881695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdul03019
]
129881695
Messenger RNA biogenesis [BR:
sdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
129881695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
RRM_PARP14_1
Motif
Other DBs
NCBI-GeneID:
129881695
NCBI-ProteinID:
XP_055811788
LinkDB
All DBs
Position
3:66783056..66786112
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AA seq
387 aa
AA seq
DB search
MDSDEGKLFVGGLGWDIKEDKLRSYFTHYGEVTHAIIMRDRVTGLSRGFAFVVFSDPSVI
DIILQEKHTIDGRPVEAKRALPRAQHQSWRSRLPHASEDTRLEGNIKTRKIFVGGLPSSL
TEEEFCKYFQNYGNVTDKVIMFDPNTGRPRGFGFITFDSEDAADKVLHKNFHELKNKLVE
VKRALPKEANPAGNGRVGGYPGYGSYDPIRVPESAFCGYTPYNSYGALNYGYGYDPYTCY
SGAAGVYMNPSLAGIVYASSLPGVTRTQWSSQNFGYGDFCNLNASYGASSSFGASSTRAT
IMASTSTSQGHASQNNNQGNGCSIHTKNEGPFTDSDGNETGDRHKGSAPNSSSGEATNQA
GQHEANGCNTATVFDSNNGSPGFPDAA
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggattcagatgaaggaaagctatttgttggtggattaggatgggacataaaagaagat
aaactaagaagctattttacccattatggagaagttacacatgccataatcatgcgtgac
agagtcactggcttatctagaggatttgcctttgttgtgttttctgatccttctgttatt
gatatcattcttcaggagaaacataccattgatggccgtccggtggaagctaagagggct
ttaccaagagcacaacatcagagctggagatcgcgacttcctcatgccagtgaagataca
agactggaaggaaatatcaaaacaagaaaaatatttgtgggtgggctaccttcatccctt
actgaagaagagttttgcaagtacttccaaaattatggtaatgtgacagataaagtaatt
atgtttgacccaaacactggtcgcccacgaggatttggttttatcacctttgactcagaa
gatgctgctgataaagttcttcataaaaactttcatgaactgaaaaataagctcgtggag
gtaaaacgtgccctgccaaaagaagcaaatcctgctggcaatggtcgtgttggaggttac
ccgggttatggttcttatgatcccattagagttccggagtctgcattttgtggttacact
ccctataacagctacggagctctgaattatggttatggttacgatccttatacttgctac
agtggggcagctggagtatatatgaatccatctttggccggcattgtttacgctagcagc
ttgcctggtgtcacaagaacccagtggagcagccagaattttgggtatggtgatttctgt
aatttaaatgcaagttatggcgcttctagttcttttggtgcttcatccactcgtgctact
attatggcatcaactagtacatctcagggtcatgcttctcaaaacaataatcaggggaat
ggttgcagcatccacacaaaaaatgaagggccttttactgattctgatggtaacgagact
ggtgataggcataaaggtagtgctccaaacagcagcagtggtgaggcaactaatcaggca
gggcaacacgaggcaaatgggtgcaacacagcaacagtctttgacagcaataatggttct
ccaggctttcctgatgcagcttga
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