Solanum dulcamara (climbing nightshade): 129881731
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Entry
129881731 CDS
T09577
Name
(RefSeq) protein ELC-like
KO
K12183
ESCRT-I complex subunit TSG101
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03250
Viral life cycle - HIV-1
sdul03272
Virion - Hepatitis viruses
sdul04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
129881731
03272 Virion - Hepatitis viruses
129881731
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129881731
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdul04131
]
129881731
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sdul04147
]
129881731
Membrane trafficking [BR:
sdul04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
129881731
Exosome [BR:
sdul04147
]
Exosomal proteins
Proteins found in most exosomes
129881731
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UEV
Vps23_core
RWD
DnaB_C
Flagellin_N
UQ_con
Motif
Other DBs
NCBI-GeneID:
129881731
NCBI-ProteinID:
XP_055811817
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Position
3:complement(70488987..70490502)
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AA seq
349 aa
AA seq
DB search
MDYFKSLAHELFSTNFETSPSSIQFIDAALSCTSPHFAPSYTDPNQKRIIRRHLVSLLHD
YLSFKPSIDAFMHEDGTSVNLLNANGELQVSSSTPAIPLTIWLHESYPFVAPIVLMSTNT
TYPIYDNHPFVDSSSGAISSFYLVNWKYPGCNLSELVHNLVKIFSHNHPFYYSPSTDNFF
HPSFASRREAVDRLSCTLHYDMTELLSKTHEEVVELSSLREQMVRRAIVAEFSVDENENE
RTELKERVKILTDEVDKLSNWLKVNDQDSFSGHEIEDAFEATDENSKTLLDCLAADRATE
DLMYSLDKAVEQGVIPFGTYIKQVRLLAKEQYFGRAKLEKMGISLQWLD
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggattacttcaaatcactagctcatgagttattttccacaaattttgaaacatctcca
tcttcaatccaattcatagatgctgcactttcttgtacaagcccacattttgcaccatct
tacacagatcctaatcaaaaacgtataattcgaaggcacctcgtctctctgcttcatgat
tatctttctttcaaaccttccatcgatgcattcatgcacgaagatggcacgagtgtcaac
ttacttaacgcaaacggagagttgcaagtctcttcctccacccctgcaatccctcttacc
atttggttacatgaaagttacccttttgtagcccctattgtccttatgtctacaaatact
acctatccaatttatgacaaccatccttttgttgactcttcatcaggtgctatttcttca
ttttacttagtaaattggaagtaccctggctgcaacctttctgaacttgtgcacaacctt
gtcaagatcttctcacataatcatcctttttactattcaccttcaactgacaatttcttt
cacccttctttcgcttctaggagagaggctgtggaccgtctctcgtgcacacttcattat
gacatgacagaattactgtccaagactcatgaagaggtggtggagctttcaagccttaga
gaacaaatggttagaagggcaattgttgctgagttttcggtcgatgagaatgaaaatgaa
aggacagaattgaaggaaagggtgaaaattttgacagacgaagtggataaactgtcgaat
tggctaaaagttaatgatcaagattcattttcaggacatgaaattgaggatgcatttgaa
gctactgatgagaattcaaaaacattacttgattgcctagcagcagacagggcaacagaa
gatttgatgtattcattagataaggcagttgagcaaggggtaataccttttggtacatat
ataaagcaagtgagacttttggccaaagaacaatactttggtagagctaagcttgaaaaa
atgggaatatctctccagtggcttgattga
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