Solanum dulcamara (climbing nightshade): 129882034
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Entry
129882034 CDS
T09577
Name
(RefSeq) ABC transporter B family member 1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
129882034
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdul02000
]
129882034
04147 Exosome [BR:
sdul04147
]
129882034
04090 CD molecules [BR:
sdul04090
]
129882034
Enzymes [BR:
sdul01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
129882034
Transporters [BR:
sdul02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
129882034
Exosome [BR:
sdul04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
129882034
CD molecules [BR:
sdul04090
]
Proteins
129882034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_16
Zeta_toxin
AAA_29
RsgA_GTPase
nSTAND1
AAA_5
AAA_15
AAA_25
APS_kinase
DUF815
DUF87
Rad17
DUF4349
Motif
Other DBs
NCBI-GeneID:
129882034
NCBI-ProteinID:
XP_055812126
LinkDB
All DBs
Position
3:complement(431387..438939)
Genome browser
AA seq
1331 aa
AA seq
DB search
MSQDSEEIKTIEHWKWSEMQGLELVVSEDKNSNTPTTTTTTNNHQFQETKMEVKKEEGGD
VEKPSTPPPAVGFGELFRFADGLDCVLMTIGSLGAFVHGCSLPLFLRFFADLVNSFGSYA
NDVDKMTQEVLKYAFYFLVVGAAIWASSWAEISCWMWTGERQTTKMRIKYLEAALNQDIQ
YFDTEVRTSDVVSAINTDAVVVQDAISEKLGNFIHYMATFLSGFVVGFTAVWQLALVTLA
VVPLIAVIGAIYTMTSAKLSSQSQESLSKAGNIVEQTVVQIRTVLAFVGEAKALQAYSAA
LRVSQKIGYKSGFSKGLGLGATYFTVFCCYALLLWYGGYLVRHHFTNGGLAIATMFAVMI
GGLALGQSAPSMTAFAKARVAAAKIFRIIDHKPSVDRNAKTGLELDTVSGQLELKNVEFS
YPSRPEIKILNNFNLIVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQLLLDGNDIKT
LKLKWLRQQIGLVSQEPALFATSIKENILLGRPDATQIEIEEAARVANAHSFIIKLPDGF
DTQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGR
TTLVIAHRLSTIRKADLVAVLQQGSVSEIGSHDELMSKGENGMYAKLIKMQETAHETALS
NARKSSARPSSARNSVSSPIITRNSSYGRSPYSRRLSDFSTSDFSLSLDAAYSNYRNEKL
AFKDQASSFGRLAKMNSPEWTYALIGSIGSVICGSLSAFFAYVLSAVLSVYYNPDHAYMS
KQIAKYCYLLIGVSSAALIFNTLQHYYWDVVGENLTKRVREKMLAAVLKMEMAWFDQEEN
DSSRIAARLSLDANNVRSAIGDRISVIMQNSALMLVACTAGFVLQWRLALVLIGVFPVVV
AATVLQKMFMKGFSGDLEAAHAKATQLAGEAVANVRTVAAFNSETKIVNLFDSSLQTPLR
RCFWKGQIAGSGYGIAQFLLYASYALGLWYASWLVKHGISDFSKTIRVFMVLMVSANGAA
ETLTLAPDFIKGGRAMRSVFELLDRKTEVEPDDPDATAVPDRLRGEVEFKHVDFSYPTRP
DVSIFRDLNLRARAGKTLALVGPSGCGKSSVIALIERFYEPSSGRVIIDGKDIRKYNLKS
LRRHIAVVPQEPCLFATTIYENIAYGHESATEAEITEAATLANAHKFISALPDGYKTFVG
ERGVQLSGGQKQRIAIARAFLRKAELMLLDEATSALDAESERCVQEALDRACAGKTTIVV
AHRLSTIRNAHVIAVIDDGKVAEQGSHSHLLKNYSDGIYARMIQLQRFTHGEAVNMATGS
TSSVRSKEDQD
NT seq
3996 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaagattctgaggagataaagaccattgaacattggaaatggtctgaaatgcaa
ggccttgaactagttgtctctgaagacaaaaattcaaacacccccacaacaacaacaaca
acaaataatcatcaatttcaagaaacaaaaatggaggttaaaaaagaagaagggggtgat
gtggaaaagccaagtacacctccacctgcagttggttttggtgaacttttcagatttgct
gatggtttggattgtgtactaatgacaattggttcacttggtgcttttgttcatggatgt
tctttgcctttgtttcttagattctttgctgatcttgttaattcttttggctcttatgct
aatgatgttgataagatgactcaagaagttttaaagtatgcattttactttcttgtagtt
ggtgctgcaatatgggcatcttcatgggcagagatatcatgctggatgtggactggtgag
agacaaacaacaaagatgaggatcaaatacttagaggctgctttgaaccaagatattcaa
tattttgatactgaagttagaacttctgatgttgtttctgcaattaacactgatgctgta
gtggtccaagatgccattagtgagaagttgggtaatttcattcattatatggctacattt
ttgtctggatttgtggtgggatttacagcagtgtggcaattagctctagttactcttgct
gtagttcctcttattgctgtaattggtgctatctacactatgacatcagccaaattgtca
agtcaaagtcaagaatcactttcaaaagcagggaacattgttgaacagacagttgttcaa
attcggacggtattggcgtttgttggtgaggcaaaagcattgcaagcatactcagcagca
cttagagtttctcaaaagattggatataagagtggattttcaaaaggattaggacttgga
gctacatattttactgtcttttgttgttatgctttacttttatggtatgggggctattta
gttaggcatcatttcaccaatggaggacttgccatagcaacaatgtttgcagtcatgata
ggtggattggctttgggacaatctgcacctagcatgactgcatttgcaaaggctagagtt
gctgctgccaagattttccgaatcatcgatcataaaccgagtgttgacagaaacgccaag
acgggtttggagttagacactgttagtggccaactagagcttaaaaatgttgaattctct
tatccttcaaggccagaaatcaagattctgaacaatttcaacctcattgttcctgctgga
aagaccattgctttagtcggaagtagtggttctgggaaaagcactgtggtctcccttatc
gaaagattttatgatcccacctcaggacaacttctgctcgatggaaatgacataaagacg
ctgaaattgaaatggctgaggcagcaaattggccttgtgagccaagaaccagcacttttc
gcgacaagcatcaaagaaaacatactattaggaaggccagatgcaacacaaattgagatt
gaagaagctgctagagttgccaatgcccattctttcataatcaaacttcctgatggcttt
gatactcaggtaggggagagaggattacaattatcgggtggacagaagcagagaattgct
atagcgagggccatgcttaagaatccagctatccttctcttagatgaggcaactagtgct
ttagattccgagtcagaaaagctagtgcaggaggctctagacaggttcatgatcggacga
acgactcttgtgattgctcatcgcctgtctactatccggaaggctgacctggtggctgta
cttcaacaaggcagtgtctcagaaattggaagccacgatgagcttatgagtaaaggagag
aatggtatgtatgccaagctcatcaaaatgcaagaaacggctcatgaaactgctcttagt
aatgccagaaagagcagtgcaaggccctcgagtgcaaggaactccgtaagctcaccaatc
atcactagaaactcttcctacggtcgatcaccatactcccgtcggttgtctgacttttct
acctcggacttcagcctctcccttgatgctgcatattctaattaccgaaatgaaaagctt
gcattcaaggaccaagctagttcgtttggccgccttgcaaaaatgaactctcctgagtgg
acttacgctttgattggttctataggttctgtcatctgtggttcacttagtgctttcttt
gcatacgtcttgagtgctgttcttagcgtatactacaatccggaccatgcctacatgagc
aaacaaatcgcgaaatactgttatcttttgattggagtttcatcagctgcactcattttc
aatactctacagcattactactgggatgtagtgggggagaatttgaccaaacgggtgaga
gagaaaatgctggcagcagtgcttaaaatggaaatggcatggttcgatcaggaagagaac
gatagttcaagaattgcggccaggctctctctggatgccaacaatgttagatctgccatc
ggggatagaatctctgtcattatgcagaactcagctctcatgctagtcgcatgcactgca
ggattcgtattgcagtggcgtctggccctcgtcctcattggtgtcttccccgtggtcgtt
gcagcaacagttttacagaaaatgttcatgaagggattctcaggagacttagaagctgct
catgctaaagccacacaacttgctggagaagctgtagctaatgtaagaacagttgctgcc
tttaattcggaaacgaaaatagtcaaccttttcgattccagcctccagactccgcttagg
cgttgcttctggaaggggcagattgcgggaagtggttatgggattgctcaattcttgctt
tatgcttcctatgcccttggcctttggtatgcctcctggcttgtcaagcacgggatctct
gacttctcaaagactatccgtgttttcatggtcctcatggtttctgctaatggtgcagcc
gaaacattgaccttagcccctgacttcatcaagggtggcagagcaatgcgttctgttttc
gaactccttgaccgtaaaacagaagttgagccggatgatcctgatgcaaccgctgtccct
gatcgtcttcgtggtgaagtggaatttaagcatgtagacttctcatatcccactaggcct
gacgtgtcaattttccgtgatttgaatcttcgtgctcgagctggaaagactcttgctcta
gttggaccaagtggatgtggaaagagctcagtcattgcacttatagagcggttttacgag
ccatcatccggacgtgtcatcatcgatggcaaggatattcggaagtacaaccttaaatct
ctgagaagacacattgctgtagtgccacaagaaccttgcctctttgctaccaccatctat
gaaaacatcgcgtatggacatgaatcagcaaccgaagctgagataaccgaagcagcaacc
ttggcaaacgcccacaagttcatatctgcattgcctgatggctacaaaacatttgtcgga
gaaaggggagttcaattgtctggtggacaaaagcaaagaatcgccattgctcgtgctttc
ctaaggaaagcagagctaatgctgctggatgaagcaacaagtgcactcgatgcagagtct
gagagatgtgtacaagaagcattggatcgcgcttgtgcaggtaagaccaccattgttgtt
gcacataggctatccacaatcagaaatgcacatgtgatcgcggtcatagacgatgggaaa
gtagcagaacaaggttctcattctcatctgttgaaaaactactcagacggtatttatgcg
cgtatgatacaactacaacgatttacacacggagaagctgtgaatatggcaacaggatca
acgtcttctgtgcgttccaaggaagatcaagattga
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integrated database retrieval system
