Solanum dulcamara (climbing nightshade): 129882042
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Entry
129882042 CDS
T09577
Name
(RefSeq) uncharacterized protein LOC129882042 isoform X1
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129882042
Enzymes [BR:
sdul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129882042
Ubiquitin system [BR:
sdul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129882042
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-ANAPC11
zf-rbx1
zf-RING_5
zf-C3HC4_3
zf-C3HC4_2
zf-RING_11
zf-C3HC4_4
zf-RING_Vps41
Beta-prop_SPT8
zf_RING_Vps8
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
129882042
NCBI-ProteinID:
XP_055812140
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Position
3:complement(599890..611664)
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AA seq
645 aa
AA seq
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MAGDSDGADPDYERFLRHIGAAADESELAAEDIILLEDGEEYEEEEEEETDEDEEEEDEE
EEEDEDDEEESSTGRRTLRRVLYGDRGATRSSSQERGINVENLDNSAVELESGDDTTRSK
GGEAASQNVDKEEADGGEGEWNRSEIDGLFCSICMEAWTNDGDHQICCLPCGHIYGLSCI
KKWLQQKGRSGKCPQCNKKCTVKGIRVLYASRLHAVDEELQKKIRSLETSCFSLEKECSD
WCKKEIEWRRREAELHKQVEYLKERTTEGSPTEMQSRSSVRIFGCNINSKSERCEYVNSF
LLQKEIQIDGARLFDVDINGENLLIARRLSGMGGQHMLTKISLLSPHEREDILLPVSMKT
IKDLHVSPYDRFILLASLGKKLSVLSSENNHTVLTYDLPTVPWSCAWDANNSHYMYAGLQ
NGMVLQFDRRQTTRPVESMTGLTGNPVHTVHSLSSPTLGGGIRSVLSASSVGLCHWNFGS
SDERPCLVPESENQGICISLACGDRNDDIVASFRPKLEISGDMAASQILPTPVSTIEQAV
EGSHVLYRRVGSRYQKLGASCAKVSGIRLPKTAIINRGKKSPMFASGDDATMELVLQELP
SLNVAQRINSLNSPVRDVRYARLQSTVLLGFLSEDKLQLCSHKLQ
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgacagtgacggtgcagatcccgattacgagaggtttctccgtcacatcggc
gccgccgcggacgagagtgaactcgccgccgaagacatcattttgttagaagatggagaa
gagtacgaggaagaagaagaagaagagacggatgaagacgaagaagaagaagatgaggag
gaggaggaggatgaagatgatgaagaagagtcgagtactggaaggaggacgttgcgtagg
gttttgtatggggatcgtggtgctacgagaagttcatctcaagagcgggggattaatgtt
gagaatttggataattctgctgtggaactggaaagtggagatgatacgactaggagtaaa
ggcggtgaagcggcgtcgcagaatgttgataaggaagaagctgatggaggagaaggagag
tggaatcgaagtgaaattgatggtttgttttgctctatttgcatggaagcttggactaac
gacggtgaccaccaaatttgctgtcttccttgtgggcatatatatggtttgtcgtgtatc
aaaaagtggttgcaacaaaaagggaggtcaggaaagtgcccccaatgtaataagaaatgc
acagtgaagggtattcgagtactttatgcttctcgacttcatgctgttgacgaagagctt
caaaagaaaattcggtctcttgaaaccagttgtttttctcttgaaaaagagtgctctgat
tggtgtaagaaagaaattgagtggaggaggagagaagctgagttgcataagcaagtggag
tacctcaaagagagaacaactgaaggctcgccaactgaaatgcaaagcaggtcatctgta
cgcattttcggatgcaatatcaactccaaatctgaaagatgtgaatatgtgaatagtttt
cttttgcagaaagagattcagattgatggtgctcgcctatttgatgtggacatcaatggt
gagaatttgctgattgccagaaggctctctggaatgggaggacagcatatgcttaccaaa
atcagtctgttgtctccacatgaaagagaagacattctgcttcctgtgagcatgaaaact
atcaaggacttgcatgtttctccttatgatagattcatactcttggcttctttagggaag
aagttgtcagttcttagttctgaaaacaaccatactgttctgacatatgacttaccgact
gttccttggtcatgtgcgtgggatgccaacaattcgcattacatgtatgccggtttacag
aatggcatggttttgcagtttgatcggcgtcaaactacgaggccagtggaatctatgacg
gggttgacaggaaatcctgttcatactgtgcattccctttcatctcctacacttggtggt
ggcattagaagtgttctttctgcatcttcagtaggcttgtgccactggaactttggtagt
agtgacgaaaggccgtgcttggtccctgagtcagagaatcaaggaatatgtatatctctc
gcttgtggagatagaaatgatgacatagttgcctctttccgtcctaaactggagatctct
ggcgatatggctgcttctcaaatattgcccactccagtttctacaatagagcaagcagta
gagggttctcatgttctttacaggagagttggtagcagataccagaagttaggagcttct
tgtgccaaagttagtggcatccgacttccaaaaactgctataattaatagagggaagaag
agccccatgtttgcttctggtgatgacgcaacaatggaactggtcttacaagaattgcca
tctttaaatgtggctcagcgaattaattctctgaacagccctgttcgcgatgttaggtat
gcacgcctccaaagtacggtattgctgggttttttgagtgaggataaactgcagctttgc
tcacataagctccagtga
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