Solanum dulcamara (climbing nightshade): 129882085
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Entry
129882085 CDS
T09577
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like isoform X1
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul00900
Terpenoid backbone biosynthesis
sdul01100
Metabolic pathways
sdul01110
Biosynthesis of secondary metabolites
Module
sdul_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
129882085
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sdul01006
]
129882085
Enzymes [BR:
sdul01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
129882085
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
129882085
2.5.1.29 geranylgeranyl diphosphate synthase
129882085
Prenyltransferases [BR:
sdul01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
129882085
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
129882085
NCBI-ProteinID:
XP_055812206
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All DBs
Position
3:complement(1321909..1325276)
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AA seq
334 aa
AA seq
DB search
MVLSMVMSCSPSLCLPRSRMVMQKTIRCSSSVSTASESIKFDLKTYWTTLIHDINQKLDE
AVPVKYPNQIYEAMRYSVLAKGAKRSPPIMCVAACELFGGNRLSAFPTACALEMVHAASL
IHDDLPCMDDDTTRRGLPANHTVYGVDMAILAGDALFPLGFQHIVSHTPSDLVPEDRVLR
VITEIARAVGSTGMAAGQFLDLEGGPNAVDFVQEKKYGEMGECSAVCGALLAGASDEEIQ
HMRKYGRAVGVLYQVTDDILEAKKTEDKTEGKKKKGKSYVSIYGVEKAVKVAEDLRAQAK
RELDGLEKYGDKVMPLYSFVDYAADRGFSIDGQV
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggttttatctatggtgatgagctgttcacctagcttatgccttccaaggagccgcatg
gttatgcagaaaacaatccggtgctcttcttctgtttcgacagcgtctgagtccatcaag
tttgatcttaagacttattggacaactctaattcatgatatcaaccagaaacttgatgag
gcagttccagttaagtacccaaatcagatttatgaggccatgcgctactctgtcctggcc
aagggtgccaaaaggtccccacccatcatgtgtgtcgcggcttgtgagcttttcggtgga
aatcgcctttctgcctttcccactgcctgtgccttagagatggttcatgctgcttcattg
attcatgatgatttgccctgcatggatgatgacacaactcgacgaggtctgcctgcaaac
cacacggtttatggtgtagatatggcaattttagctggggatgccttgttccctcttggt
ttccagcatattgtgtcccacactccaagtgatctcgttcccgaggatcgagtcctccgg
gtcattacagagattgctcgagctgtggggtccactggcatggctgctggtcagttcctt
gaccttgagggtggaccaaatgctgttgactttgttcaagaaaagaaatatggtgaaatg
ggtgagtgctctgccgtttgtggagctctcttggctggtgcttcagatgaggagatccaa
cacatgagaaaatatggtcgagctgttggtgtcttatatcaggttactgatgatatattg
gaagcaaagaagaccgaggacaaaaccgaggggaagaaaaagaaaggtaaaagctatgtc
agcatttatggcgttgagaaggctgtgaaagttgccgaggatcttagagcgcaggctaag
agagagttagatggtctcgagaagtacggcgataaagtcatgccactttacagctttgtt
gattatgctgcagatagaggttttagcattgatggccaagtctag
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