KEGG   Solanum dulcamara (climbing nightshade): 129882110
Entry
129882110         CDS       T09577                                 
Name
(RefSeq) protein ELC-like
  KO
K12183  ESCRT-I complex subunit TSG101
Organism
sdul  Solanum dulcamara (climbing nightshade)
Pathway
sdul03250  Viral life cycle - HIV-1
sdul03272  Virion - Hepatitis viruses
sdul04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    129882110
   03272 Virion - Hepatitis viruses
    129882110
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    129882110
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sdul04131]
    129882110
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sdul04147]
    129882110
Membrane trafficking [BR:sdul04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    129882110
Exosome [BR:sdul04147]
 Exosomal proteins
  Proteins found in most exosomes
   129882110
SSDB
Motif
Pfam: UEV Vps23_core
Other DBs
NCBI-GeneID: 129882110
NCBI-ProteinID: XP_055812237
LinkDB
Position
3:complement(1876523..1887745)
AA seq 399 aa
MVPPPQPAAASIHSPPSPQYTQQFLSNVLSQRGPSSLPYSEDVKWLIRQHLVSLIDTCPS
LQPRTATFIHNDGRTVNLLQSNGTVPMVYLDATYNIPVIIWLMESYPRQSPLVFVNPTRD
MVIKDSHPFVNSSGIVSIPYLTNWVYPSSNLVELTRNLSHFFSRDPPLYTRRNPNPNPHP
PPGTSFSSSGSTRPAIPPRVYPPSPYVSGSGGGRDPSEVFKRDAIDDLVVKLHSDIEGLG
KAREADMEGLFSAQGVLRCREEELRRGVKEMLDEKEGLEQQLQMVLMNADVLEGWVRDNE
AKVKKIGNVNVDVAFELCDSLSKQILDCTASDLAMEDVIYSLDKAIQEGAIPFDQYLRNV
RLLSREQFIHRATASKVKASQMQAQVSHMASRLSQYALS
NT seq 1200 nt   +upstreamnt  +downstreamnt
atggtaccaccaccacagccggcggcggcgtcgattcactctccgccatctccccaatat
actcaacaattcttaagcaacgttctctcccaacgaggtccttcttctcttccttactcc
gaagacgtcaagtggctaatccgtcaacacctcgtttcgttaatcgacacgtgtccttct
cttcaaccgagaaccgctactttcattcacaacgacggccgtactgtgaatctccttcag
tcaaacggcaccgttccgatggtatatctagatgcaacctacaacattccggtcattatt
tggttaatggaatcttaccctcgtcaatcaccgttggtgttcgtgaaccctacgcgcgat
atggtcatcaaagactcacatccatttgtgaactcttccggtattgtttcgatcccttat
ttgacgaattgggtttacccaagttcgaatcttgttgaattaactcgtaatttgagtcat
ttctttagccgtgatccccctttgtacacccgacggaatccgaatccgaacccgcatcct
ccgccgggtactagtttttcgagtagtgggtcgacccgacccgcgataccacctcgggtg
tatccaccatcaccttatgtgagtgggagtggaggtgggagggatccgtcggaggtgttt
aagagggatgcaatagatgatcttgtggtgaaattgcatagtgatattgaagggttgggg
aaggcgagggaggctgatatggaagggttgtttagtgcacaaggagtgttgaggtgtcga
gaggaggagttgaggagaggggttaaggaaatgctggatgaaaaggaagggttagagcag
caattacagatggttttgatgaatgctgatgtattggaggggtgggttagagataacgaa
gcgaaagtgaagaaaatagggaatgtgaatgtggacgtggcgtttgagctttgtgatagt
ctttcgaaacagatattggattgtacagcctcggatttggctatggaggatgtgatttat
tcgttggataaagctatacaggagggggcgattccttttgatcagtacttgaggaatgtt
aggttgttgtcgcgtgaacaattcattcatcgtgccacggcttcaaaggttaaggcttct
cagatgcaggcgcaagtttctcatatggcttctaggctgtctcaatatgctttgtcatag

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