Solanum dulcamara (climbing nightshade): 129882138
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Entry
129882138 CDS
T09577
Name
(RefSeq) uncharacterized protein LOC129882138 isoform X1
KO
K15200
general transcription factor 3C polypeptide 2
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdul03021
]
129882138
Transcription machinery [BR:
sdul03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
129882138
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_IFT122_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
WD40_Prp19
ASA1
Beta-prop_WDR5
Beta-prop_EIPR1
LPD39
Motif
Other DBs
NCBI-GeneID:
129882138
NCBI-ProteinID:
XP_055812278
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All DBs
Position
3:2543395..2557746
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AA seq
941 aa
AA seq
DB search
METGDDFPVAAELKRCKQKRKLQPKSKNNAPESPTTAPEKVAGAGIPVSLFDYSVENHIK
AVDTISKLTGVPEIDDTDRTELDRLASSITFLTEWRYLQYKRREVKFACENESSKGKDVI
GEVSLPQFSSAEVPKKHLVNEQPVPKESSKDFVMYVGGLAWGMDWCPQAYENTDAPIKSE
FVAIAPHSPDSSYHKTDAPLTGRGVIQIWCLLDLRQKDLIVKEDYLAQVNKKTYRNLTRS
EAATGEISGPQKPRGRPKKNPGEAVKENASGPRKPRGRPRKKPVTESLGDRDCDDHNLQP
LALEYQLQSTELSVDLSCGNMNKAQVDFGQNQERSINVASQDSQLIVSKRRGVRNKVRSK
GQTENSGVIPLTQDVAEESPAVSYPTYASNRLVSAGSNESGASSKRREKEKEGMESQTHN
STSALLAQDVNEESPNTSQTPESHGIHSSQFDENGFHVMQHIPTDVSLPRMVLCLAHNGK
IARDVKWRPSNHYDVSRHRMGYLAVILGNGSLEVWEVPFPHTIKAIYPAVQKKGTDPRFL
KLQPVFRCSMLKGCDGQSIPLTVEWSSSPPHDMILGGCHDGVVALWKFSANNSSKDTRPL
LCFRADTGRIRALSWAPLESDSRNANIIIAAGDKGLKFWDLRDPFRPLREYNVGQGVHIC
SVDWLPEPRFIVISCDDGTLKILGLPKAAYDAPVTGNLLVGTKQQGFHTFTRSLLGIWSV
QASRVTGGLRMGVEEKGMKLSMHSGTAWMTTKDLLNSKALGVAGMVAYCGVDGTAARFQM
ASRMYNDAVRTRTPHFLCGSFSEDESGISVVTPVPNTPFRMIYSGKQWRDAIPRSPHGQD
KRVIEQSDEQPLALCYGNDPNVEGGSDDELASQESKTKTKTTSKKPEADEEEATRLRQKF
EKLPPKILSIHRIRWNMNKGSERWLCYGGAAGLVRCQQIDL
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggagaccggcgacgattttccagtcgccgccgaattgaagcgttgtaagcagaagcga
aaattacaaccaaaatccaaaaacaatgctcctgaatctccaaccaccgcgccggaaaaa
gtcgccggcgccggaattccagtctcattgttcgattattcagtagagaatcacatcaaa
gcagttgatacaatttctaagctcaccggtgtaccagaaattgacgatactgatcgaact
gagcttgatcgcttagcttcctccatcacattcttaacagaatggagatatctccagtac
aaaagaagagaagttaaatttgcttgtgagaatgagagttcaaaaggaaaagatgtgatt
ggtgaagtaagtttgcctcaattctcttctgcggaagttccaaagaagcatttggtgaat
gagcagccagttcccaaagaatcgagcaaagattttgtaatgtatgttggaggtctagcg
tgggggatggactggtgtccccaagcttatgaaaatacggatgctcctatcaaaagtgag
tttgtcgcaattgctcctcattctcctgattcatcatatcacaagactgatgccccactt
acaggcagaggtgtaattcagatatggtgtcttttagatctcaggcaaaaagatttaatt
gtgaaagaagattatttagctcaggttaacaaaaagacatatcgaaatttgacaagaagt
gaagcagctacaggagaaatatctggacctcaaaaaccaagaggaagaccaaaaaagaac
cctggtgaagcagttaaggaaaatgcatccggacctcgaaaaccaagaggaagaccgaga
aagaaacctgtaactgaatctttaggtgatagagattgtgacgaccacaatttacaacct
cttgctctagagtaccagctgcaatcaacagaactttctgtagatttgtcttgtggaaat
atgaataaagcccaagtagattttgggcaaaatcaagaaagatctatcaatgtggcatct
caagattctcagcttattgtttcaaagaggagaggagtgagaaacaaggtaagatcgaaa
ggtcaaactgagaattctggtgtgattcctctaacacaagatgttgctgaagagtctcct
gctgtgagttacccgacatatgctagcaatcgtcttgtatcagcagggtccaatgagagt
ggcgcctcctcaaagagaagagaaaaagaaaaagaaggaatggaaagccaaactcataat
tctacctcagctttgctggcgcaagatgtgaatgaagaatctcccaacacgtcccaaaca
cctgagagccatggcattcattcctcacagtttgatgagaatggttttcatgtaatgcag
cacataccaacggatgtttctctacctagaatggtgttatgtttagctcacaatggaaaa
atagcacgggatgttaaatggaggccttcaaatcactatgatgtctccagacacagaatg
ggttatcttgctgtgatactgggaaatggatctttagaagtgtgggaggttccttttcct
catacaattaaagctatttatcctgctgttcaaaagaagggtactgaccctcgtttcctg
aaattgcaacctgtattcagatgttcaatgcttaaggggtgtgatgggcaaagcattccg
ttaacagtggagtggtcttcttcccctccgcatgatatgattctcggtggatgtcatgat
ggagtggttgccttgtggaagttttcggccaataattcatctaaagacacaaggcctttg
ctttgcttcagggcagatacaggtcgtattcgggcgctttcctgggcaccgttggaaagt
gattcccggaatgcaaatattatcattgcagctggtgacaaggggctgaaattttgggac
ttgagggatcccttccgtcctttgcgggagtataatgtaggccagggagttcatatttgc
agtgtggactggttgccagagccaagatttattgtaatatcatgtgatgatgggacacta
aagatccttggcttgccgaaggctgcatatgatgcacctgtcacaggaaaccttttagtt
ggaactaaacaacagggattccatactttcactcggtctctacttgggatatggagtgtg
caagcttctcgagtaacagggggactgaggatgggggtagaagagaagggtatgaaactc
tctatgcatagtggcacagcttggatgacgacgaaggatctgcttaattctaaggccttg
ggtgttgcgggcatggttgcatactgtggggtagatggtacagctgctcggtttcagatg
gctagcagaatgtataatgatgctgtgagaactcgtaccccacattttctttgtggatca
ttttccgaggatgaatcaggtatcagcgtcgttactccagtgccaaatactcccttccga
atgatctactcagggaaacagtggcgtgatgccatcccgagatctccacatggtcaggac
aaacgagtgatagagcaatcagatgaacaacccctggctctatgttatggcaatgatcca
aacgttgaaggaggatcagatgacgagttagcgtctcaggaatccaaaacaaaaacaaaa
actacgagcaagaaaccggaagctgatgaagaagaagcaacacgattgagacagaaattt
gaaaagttacctcccaaaattttgtcgatccaccggataagatggaatatgaacaaaggc
agtgagagatggctatgctatggaggagctgccgggctggtacgctgtcaacagattgat
ttatag
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