Solanum dulcamara (climbing nightshade): 129882220
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Entry
129882220 CDS
T09577
Name
(RefSeq) ribonuclease MRP protein subunit POP4-like
KO
K03538
ribonuclease P protein subunit POP4 [EC:
3.1.26.5
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
129882220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdul03009
]
129882220
03016 Transfer RNA biogenesis [BR:
sdul03016
]
129882220
03029 Mitochondrial biogenesis [BR:
sdul03029
]
129882220
Enzymes [BR:
sdul01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
129882220
Ribosome biogenesis [BR:
sdul03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
129882220
Transfer RNA biogenesis [BR:
sdul03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
129882220
Mitochondrial biogenesis [BR:
sdul03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
129882220
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_P-MRP_p29
DUF1178
Motif
Other DBs
NCBI-GeneID:
129882220
NCBI-ProteinID:
XP_055812395
LinkDB
All DBs
Position
3:complement(4117628..4129227)
Genome browser
AA seq
362 aa
AA seq
DB search
MIAATAAQSAASVVQVGTKELTTKLLCTSTDSTGYLPPATSNRREGSTTMASETMAEQQK
KRTMEALERRFAQAKAEIHHQQHKNKKITVTTTKTPDENNIELTSHGINSSLSPLKSIAT
SSAPSSKKGHISFSGHTSAQDVELNNPAYLQISHSVDDNLLKITTEISGKSMTANDILHD
LLQHGDSAQKYMQGSKNVKVDNWILLDNVVRKSSIATGARSRALQRQSKRSKRHMSIKQH
KKFGSFDLPQESHNYDIFKPMHDKWKDYVKKLLKNIGKNQLAQCLLNADLHGALILVVQC
KIAGLIGVRGIMIRETVETFGIITEENKFQVVPKKLSVFMLQVDCWKVTLLGDKLTSRNM
TT
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgatagctgcaacagcagcacagtcggctgcaagtgtggttcaagtggggacaaaggaa
ttgactactaagcttttgtgcacctcgactgattccacgggatacctgccacctgccacc
agcaacaggagagaggggagcacaacaatggcgagcgaaacaatggctgaacaacaaaag
aaacgaacaatggaggcattagaacgaagattcgctcaagcaaaagctgaaattcatcat
caacagcacaagaataagaaaatcactgttactacaacaaaaactccagatgaaaacaac
attgaactcacttcccatggtatcaattcttcgctttcgcctctcaaatcaatagcaact
tcctcagctccatcatccaaaaaaggccatatatctttttctggccatacatctgctcaa
gatgttgaactgaataatccagcataccttcagatatcccattcagtagacgataatctt
ctgaaaattaccactgagatttctggtaaaagcatgactgctaacgatattttgcacgat
cttctccaacatggtgattcagcgcagaaatatatgcaggggtcaaaaaatgtgaaagtt
gataattggattcttcttgataatgttgtgcgaaaaagcagcattgctactggagctcgt
agtcgggctttgcagagacagtcaaagagatctaaaagacatatgtccataaagcaacat
aagaagtttggatcatttgatttgcctcaagagtctcataattatgacatcttcaagcca
atgcatgataagtggaaagactacgtgaaaaaactcctaaagaatattgggaaaaatcag
ttagcacaatgtcttcttaatgcagacttacatggtgcactaattctagttgttcagtgc
aaaatagcaggcttaattggtgtacgtggtatcatgattcgtgagactgtagaaacattt
ggaataatcacagaagagaacaaattccaagttgtaccaaaaaagctctctgtatttatg
ctacaagtggattgctggaaagttacattacttggagacaaactcacttcgagaaacatg
actacatga
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