Solanum dulcamara (climbing nightshade): 129882231
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Entry
129882231 CDS
T09577
Name
(RefSeq) heat shock cognate 70 kDa protein 2-like
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03040
Spliceosome
sdul04141
Protein processing in endoplasmic reticulum
sdul04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129882231
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129882231
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129882231
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sdul01009
]
129882231
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sdul03041
]
129882231
03009 Ribosome biogenesis [BR:
sdul03009
]
129882231
03110 Chaperones and folding catalysts [BR:
sdul03110
]
129882231
04131 Membrane trafficking [BR:
sdul04131
]
129882231
03051 Proteasome [BR:
sdul03051
]
129882231
03029 Mitochondrial biogenesis [BR:
sdul03029
]
129882231
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sdul04147
]
129882231
Protein phosphatases and associated proteins [BR:
sdul01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
129882231
Spliceosome [BR:
sdul03041
]
Complex B
Other components
Prp19 complex
129882231
Complex C
Prp19-CDC5 complex
129882231
Ribosome biogenesis [BR:
sdul03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
129882231
Chaperones and folding catalysts [BR:
sdul03110
]
Heat shock proteins
HSP70 / DNAK
129882231
Membrane trafficking [BR:
sdul04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
129882231
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
129882231
Proteasome [BR:
sdul03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
129882231
Mitochondrial biogenesis [BR:
sdul03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
129882231
Exosome [BR:
sdul04147
]
Exosomal proteins
Proteins found in most exosomes
129882231
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
DDR
Motif
Other DBs
NCBI-GeneID:
129882231
NCBI-ProteinID:
XP_055812408
LinkDB
All DBs
Position
3:4418668..4422335
Genome browser
AA seq
649 aa
AA seq
DB search
MSGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDSERLIGDAAKN
QVAMNPINTVFDAKRLIGRRFSDATVQSDIKHWPFKVIAGPGDKPMIVVNYKGEEKQFAA
EEISSMVLIKMREIAEAFLGSTVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEP
TAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD
NRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFY
STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKNSIHDVVLVGGSTRIPKVQQLLQDFF
NGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLI
PRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI
TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEDHKK
KVEAKNALENYAYNMRNTIKDEKIASKLPEADKKKIEEAIEQAIQWLDANQLAESDEFED
KMKELESICNPIIAKMYQGAGGDMGADMGDDGPAPSGGSGAGPKIEEVD
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaaagggtgaaggtccagcaatcggtattgatctcggaacaacatactcttgc
gtcggtgtttggcagcatgatcgtgttgagatcatcgctaatgatcaaggaaacagaacg
acgccgtcttatgttggattcactgactctgagcgtctcattggtgatgctgctaagaat
caggtcgcaatgaaccctatcaacactgtattcgatgcaaaaaggttgattggtaggaga
ttcagtgatgcaacagtgcagagtgacattaagcattggccatttaaggtcattgctgga
cctggtgataagccaatgattgttgttaactacaagggtgaggagaagcagtttgctgct
gaggaaatctcttctatggtgctcattaagatgagggagattgctgaagctttccttggt
tccactgtcaagaatgctgtggttaccgtcccagcctactttaacgactctcagcgtcag
gctaccaaggatgctggtgttattgctggtctgaatgttatgcgtattatcaacgagcct
acagctgctgccattgcttatggtctggataagaaggcaactagtgttggtgagaagaat
gtgttgatctttgatcttggtggtggtacctttgatgtatctctccttaccattgaggaa
ggtatctttgaggtgaaggccactgctggagacactcatcttggaggtgaggactttgac
aacaggatggtgaaccattttgttcaagaatttaagaggaagaacaagaaggatatcagt
ggtaatcctagggcacttagaaggttgagaactgcttgtgagagggcgaagaggaccctt
tcatccactgctcagaccacaattgagattgattctctctatgagggtattgatttctat
tccaccattacccgtgctagatttgaagagctcaacatggatctgttcaggaagtgcatg
gaaccagttgagaagtgtttgagagatgctaagatggacaagaactctatccatgatgtt
gtacttgttggtggctccaccagaattcccaaggttcagcagctcctgcaagactttttc
aatgggaaggagctctgcaagagcatcaaccctgatgaagctgttgcttatggtgctgct
gtacaagctgcaattttgagtggtgaaggtaatgagaaggtgcaagacttgttgctgttg
gatgttacacctctttcccttggacttgaaactgctggtggtgtcatgactgtgttgatc
cccagaaataccactatcccaaccaagaaagagcaggtcttctcaacctactcagacaat
cagcctggtgtgttgatccaggtatatgaaggtgagagaactaggaccagggacaacaac
ttgcttggcaaatttgagctctctggtattcctcctgctcccaggggagttcctcagatc
acagtgtgctttgacattgatgccaatggcatcttgaatgtttctgctgaggacaagacc
actggacaaaagaacaagatcaccatcaccaatgacaagggcagactctccaaggaggag
attgagaagatggttcaagaagcggagaaatacaaatccgaggatgaagaccacaagaag
aaggtagaggcaaagaatgctttggagaactatgcatacaacatgaggaacaccatcaag
gatgagaagattgcatccaagctgcctgaggcagacaagaagaagattgaggaagccatt
gagcaggccatccagtggctcgatgccaatcagcttgctgagtcggacgaattcgaggac
aagatgaaggagttggagagcatctgcaatccaattattgccaagatgtaccaaggtgct
ggtggtgacatgggtgctgacatgggtgatgatggtcctgctcctagtggtggcagcggt
gctggtcccaagatcgaggaggttgactaa
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