Solanum dulcamara (climbing nightshade): 129882259
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Entry
129882259 CDS
T09577
Name
(RefSeq) RHOMBOID-like protein 1
KO
K27605
rhomboid-like protein, plant [EC:
3.4.21.105
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sdul01002
]
129882259
Enzymes [BR:
sdul01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
129882259
Peptidases and inhibitors [BR:
sdul01002
]
Serine peptidases
Family S54: Rhomboid family
129882259
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Gene cluster
GFIT
Motif
Pfam:
Rhomboid
CcmH
Motif
Other DBs
NCBI-GeneID:
129882259
NCBI-ProteinID:
XP_055812442
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Position
3:complement(4857386..4871254)
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AA seq
385 aa
AA seq
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MAGRVPPQPEIQIQVHSKKGGNSVYPVETATTTTASSGPAFYREIKHFKKWFPWLIPSFV
IVNVVMFLATMYVNNCPHNSVSCFAGFLGRFSFQPFSENPLLGPSSITLEKMGALDVNKV
VHEHQGWRLITCMWLHGGVFHLLANMLSLLVIGIRLEREFGFVRIGLLYIIAGLGGSLFS
ALFIKSNISVGASGALFGLLGSMLSELIINWTIYANKIAVLVTLVVIIVINLAVGLLPHV
DNFAHIGGFVSGFLLGFVFLIRPQFGWVSHRYGSRTYSTSAKPKFKMYQMVLWVVSLILL
IVGFTSGLVMLFRGVDLNDHCSWCHYMSCLPTSRWSCNTQPVSCMSEQTSNQLTLTCSNS
NKTRTYSLSNPSTSKIQGLCTQLCR
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggccggaagagttcctccacaaccggagatccaaatccaggtacattcgaagaaaggg
ggtaactctgtatacccagttgagaccgctacgacaacaacagcatcatcaggacctgct
ttttatagagaaattaagcatttcaagaaatggtttccatggttgataccatctttcgtt
atagttaatgtagtgatgtttttggcgaccatgtatgtgaataactgcccccacaactct
gtttcttgttttgctggattcttgggtaggttttcatttcagcccttcagtgaaaatcct
cttcttgggccttcttctatcacgctagagaagatgggtgctttagacgtgaataaggtg
gtccacgaacatcaagggtggcgccttattacttgcatgtggttgcatggtggagttttt
catttactggccaacatgctgagtcttctagtgattggcattcggctggagcgagagttt
ggatttgtgcgcattggcctgctctatatcattgctggacttggtggcagtttgttctca
gctctatttattaagtcaaatatatctgtgggtgcttctggtgcactttttgggttgctg
ggaagcatgctttctgagctcataatcaattggactatatatgccaataagattgcagtt
ttagtgacccttgtggtcatcattgttataaatctggcggttggacttctcccgcacgtt
gataacttcgctcatattggaggatttgtgtctggttttcttcttggtttcgtatttctg
atccggccccagtttggctgggtgagccacagatatggatccagaacatattcaacatcg
gctaaaccgaaattcaagatgtatcaaatggttctatgggttgtttctcttattcttctg
atagttgggtttactagtggcttggtcatgcttttccgtggagtagatttaaatgatcat
tgttcttggtgccattatatgagttgtctacccacttcaaggtggagttgcaacacacag
cctgtttcctgtatgtccgagcaaacgagtaaccagctcacattgacgtgctccaacagt
aacaagacgagaacatattcattgtcgaatccaagtacgtctaagatccaggggctgtgt
actcagctgtgccgttga
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