Solanum dulcamara (climbing nightshade): 129882294
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Entry
129882294 CDS
T09577
Name
(RefSeq) F-box/LRR-repeat protein 14
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129882294
Ubiquitin system [BR:
sdul04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
129882294
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
F-box-like
F-box_5
LRR_4
LRR_At5g56370
LRR_At1g61320_AtMIF1
F-box
Motif
Other DBs
NCBI-GeneID:
129882294
NCBI-ProteinID:
XP_055812508
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Position
3:5887059..5890113
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AA seq
467 aa
AA seq
DB search
MDDLPAELLLDILGRIKRTVDRNSVSLTCKHFYKLDNGLRISMRVGCGLHPVCDALTALC
NRFRNLEKVEIIYSGWMSKLGKQLDDNGLLILSSCCPLLKDLTLSYCTFITDAGLSYLAS
CSKLTSLKLNFAPRITGCGILSLVVGCKALCVLHLIRCLSVSSMEWLEYLGKHEMLEDLC
IKNCRVIGEGDLIKLGPTWRKLRRLQFEVDANYRYMKLYDRLSVDRWQNQWIPCENMVEL
SLVNCVISPGRGLACVIGKCKNLEKIHLDMCVGVRDCDIVCLAQKSSNLRSISLRVPSDF
SLPLLQNNPLWLTDESLKALVQNCSLLETVRLSFSDGEFPSFSSFTLNGILMLIQMCPIR
ELALDHVYSFNDVGMQALCSAQYLQILELVRCQEITDDGMQLAGQIPQLCTLRLRKCLGV
TDDGLKPLVGSYKLDLLVVEDCPQISERGVQGAAKSVTFKQDLSWMY
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggatgatttaccagctgaattacttctggatattttgggaaggattaaaagaactgtt
gatagaaactctgtatccttaacttgcaaacacttttacaaattggataatgggctgaga
atatctatgcgcgtggggtgtggtttacatcctgtctgtgatgcattaactgctctatgc
aacagattccgtaacttggagaaagtggaaattatttactctggttggatgtctaagtta
gggaagcagttggatgataacggtcttctcatcctttcaagttgttgccctctcctcaag
gacctcacattaagttattgtactttcataacggatgctggtcttagttacttggcttct
tgttcaaaacttacatccttgaagttaaactttgctcccagaattactggttgtggaatc
ttgtctcttgttgtgggctgcaaagccctttgtgtgcttcacctgattagatgtcttagt
gtcagtagtatggagtggctagaatatcttggaaaacatgaaatgcttgaagatctctgc
attaagaattgtagggtgatcggagaaggtgatttgattaaacttggacctacatggaga
aaattgagaagactgcaatttgaggttgatgccaactatagatacatgaaactttatgac
cgtttgtcagttgaccggtggcaaaaccaatggatcccatgtgagaacatggttgaactt
agcttagtgaactgtgttatcagccctgggagagggcttgcgtgtgtaattgggaagtgc
aagaatttggaaaagattcacttagacatgtgtgttggggtaagggactgtgacatagta
tgtttggcccagaaatcaagcaaccttcgatcaatctctctccgggttccatcagacttc
tcccttcctctgctacaaaacaatccattgtggttaacagatgaaagtctaaaggcactg
gttcagaactgctctttgcttgaaacggttaggttgtctttctctgatggggagttccct
tcgttttcttcctttacattgaatgggatacttatgttaatacaaatgtgtccaataaga
gaacttgctcttgaccatgtgtattcttttaatgatgttggaatgcaagctctttgttca
gctcaatatctccaaatcttggaacttgtaaggtgccaagaaattacagacgacggaatg
cagcttgctggccaaattcctcaattatgtacattacggctgaggaagtgtttgggagtg
accgatgatgggttaaagcctctcgtcgggtcttacaagttagacttgttggttgtcgag
gattgtccacagatatcggaaaggggtgttcaaggagctgcaaagtcggtcaccttcaag
caagatttgtcatggatgtactaa
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