Solanum dulcamara (climbing nightshade): 129882374
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Entry
129882374 CDS
T09577
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 2 isoform X1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sdul01009
]
129882374
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdul03021
]
129882374
Enzymes [BR:
sdul01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
129882374
Protein phosphatases and associated proteins [BR:
sdul01009
]
HAD phosphatases
Fcp/Scp phosphatases
129882374
Transcription machinery [BR:
sdul03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
129882374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
dsrm
DSRM_2
DUF4998
Motif
Other DBs
NCBI-GeneID:
129882374
NCBI-ProteinID:
XP_055812609
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Position
3:complement(9100354..9111021)
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AA seq
809 aa
AA seq
DB search
MSLGFKSAVFHGETCLGELDTVPVKDQNFQFPNNEIRIHHISSISERCHPLSILQTISSP
VRCKLEPNSNSAPTGSDQSPLINLHASCFYELKTAVVLLGEEEIHLVAMPSKQKKFPCFW
CYSVPFGLYSACLQMLNMRCLSIVFDLDETLIVANTMKSFEDRIEALRGWFGREKDPIRL
SGMSAEMRRYMEDRALLKQYLESDSVVDGGRVYRAQQEEVLRLSEGQERVVRPVIRLLEK
NVVLTRINPENRDTSVLVRLRPAWDELRTYLTAKGRKRFEVYVCTMAERDYALEIWRLLD
PGSHLINANQLMDRVVCVRSGAKKSLLTVFQNGICHPKLAMVIDDRLKVWEDKDQPRVHV
VPAFTPYYAPQAEMANAVPVLCVARNVACDVRGRFFREFDEGLLRKICEIFYEDEVVNLP
SAPDVSNYLMSEDTGFASSGNVAPIPEGMYGPEVAQRLNQQDGKVNMNSAPVSMSTNPDM
KPGSSQLTVGIAANVPAQSVRPIQPSEKPSLLGAPFRRDNSFSEADGDGKRRYPILNPSQ
DMRFRGSAEPPLLSIVPQKPSILPIPSQGGWLVEDDLNKGQMGSRSPGIFQESDASRYAK
QRGHQNFLSQGATSMVLPAYASTGKNGEANSRHEMHRQNSLHQTEGRFSQHQSLFNNRES
QLEAGRMNFLPSLATGVLQEIGRRCNSKVEFRPVVSTSEELQFSVEVFFTGERVGVGMGK
TRKDAQQQAAENALRNLAGKYISYITSHPRVADKDLDKIPVENENGFLWDTVNHVDETSV
EDRLPQVNVSEVGVNRDAAHDRSLSSLKT
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgagtctagggttcaaatcagctgtttttcatggagaaacatgtttgggagagcttgat
actgtacctgttaaggatcagaacttccaattcccaaacaacgagatacggattcatcat
atctcttcaattagtgagcggtgtcatcctctctctattctgcaaacaatttcatcacct
gttcgttgtaagcttgaaccgaactcgaattcagcgccaaccggttctgatcagtctccg
ttgataaatcttcatgcctcgtgtttctatgaactcaagactgcagtagtcttgctgggg
gaagaagaaatccatttggtagcaatgccgagtaagcagaaaaagttcccctgtttttgg
tgctattcagtgccctttggtctgtatagtgcttgtttacagatgttgaatatgaggtgt
ctatcaattgtttttgatctggatgagactttaattgttgcaaatacaatgaagtcgttt
gaggatagaattgaggctttgcggggttggtttggacgagagaaagatccaattcggttg
tctggaatgtccgctgagatgaggaggtatatggaggatcgtgcactgttgaagcagtac
ttggagagtgattctgttgttgacggtgggagagtatatagagctcagcaagaggaggta
ctacgattatctgaagggcaagagcgtgtagttcggccagtcataaggttgctggaaaag
aatgtggtccttacacggattaatccagagaatcgggataccagcgtgcttgttagatta
cgtcctgcgtgggatgagttgagaacttatttgacggcgaaaggtcggaaaaggtttgaa
gtatatgtttgcaccatggcagagagagattatgcattggagatttggaggctactcgac
ccagggtcacacctcattaatgccaatcaattgatggaccgtgttgtatgtgtcagatca
ggggccaagaagtctctacttactgtcttccaaaatggcatttgtcatccaaaattggcg
atggttattgatgaccgattaaaagtgtgggaagataaagatcagcctcgtgttcatgtt
gtccctgctttcactccatattatgctccacaagcagagatggccaatgcagttccggtc
ctgtgtgtggcgagaaatgttgcttgtgatgttagaggtcgtttctttagagagtttgat
gaaggcctactccgaaagatctgtgagatcttctatgaagatgaggttgtaaatttacct
tctgcacctgatgttagcaactacttaatgtccgaggatactggttttgcgtcatctggg
aatgttgctcctattcctgagggaatgtacgggcctgaagttgcacaaaggttgaatcaa
caggacggaaaagttaatatgaactctgctcctgtttccatgagtaccaatcctgatatg
aagccaggaagctcccagcttacggttggaattgctgcaaatgtacctgctcaatcagtg
agaccaattcaaccttcggaaaaaccaagtttgctgggagctccatttagacgagataac
agcttttctgaagctgatggtgatgggaaaagaaggtaccccatattgaatcctagtcag
gatatgaggtttcgtggttcagcagaacctcctttattatctatagtgcctcagaaacca
tccatactgcccataccatcacagggtggttggttggttgaagatgacctaaataaagga
cagatgggtagtcgatcacctggaatttttcaagaatctgatgcttcaaggtatgctaaa
cagagaggtcatcagaattttctgagtcaaggtgcaacaagcatggtgttaccggcatat
gcatctacagggaagaatggggaggcaaattccaggcatgaaatgcatagacagaattct
cttcatcagacagagggtagattctctcaacatcagtcgttatttaacaacagagaatct
cagctagaagcagggagaatgaacttcttaccctctttagctacgggggtgctgcaagaa
attggacggcgatgcaactcaaaggttgagttcaggcctgtagtgagcacaagcgaggaa
ttgcaattttcagttgaggtcttcttcaccggtgagagagttggtgttggaatgggtaag
actaggaaggatgctcaacaacaggcagctgagaatgcacttcggaacttggctggtaaa
tacatctcttacattacatctcaccctcgagtagcggataaagacttggataagattccg
gtggaaaatgaaaatgggttcttgtgggacactgtcaatcacgtggatgaaacttcagtg
gaggatagattacctcaagtaaatgtttcagaggtgggagttaatagggatgctgcccat
gaccgatcacttagttctttgaaaacgtga
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