Solanum dulcamara (climbing nightshade): 129882405
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Entry
129882405 CDS
T09577
Name
(RefSeq) LIMR family protein At5g01460
KO
K14617
LMBR1 domain-containing protein 1
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
129882405
04980 Cobalamin transport and metabolism
129882405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdul04131
]
129882405
Membrane trafficking [BR:
sdul04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
129882405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LMBR1
Uso1_p115_C
Motif
Other DBs
NCBI-GeneID:
129882405
NCBI-ProteinID:
XP_055812656
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Position
3:11583572..11597133
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AA seq
511 aa
AA seq
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MGDFNLALVIVAIVVCILVFLFNVYLLINYQHPDDANQAYFPKFVVVFGLSIAAISILML
PADVANRQACQHAIYNGACNLTLPMKQLWLAIYIVDAVLVFFVIPFAMFYYEGDQDKTMG
KRIKSALCWVVVTAIVCALLLGILYGLAGKADFTVRHLSSATTPFTNSFDFNNGQQCIGN
GSGARQCSAYSASASSETTWTMHATFPEYVVALATIVGSVLFTIFGGVGIACLPLGLIFS
FIRRPKAVITRSQYIKEATELGKKAKELKKATDALHQEERSGSKGRKWRKNVKAVEKEVL
LLEDDVKALEEMYPQGEKAETAWAMTVLGYLAKLILGILGLIVSVAWVAHIVIYLLIDPP
LSSFLNEVFIKLDDIWGLLGTAAFAFFCFYLLLAVIAGAMMLGLKLVFVTIHPMKWGATL
MNSFLFNVGLILLCSISVIQFCATAFAYYAQATAAQEIFGHNLQSLRGIKYLYKYNVFQI
GFIVLAGLTFVYYVAFGWRRKKPSGRFQLSS
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgggggatttcaatctcgccttggttatcgtagccatagttgtctgtattctcgttttc
ttattcaatgtctatcttctcatcaattatcaacatcctgatgatgctaatcaagcctat
ttccccaaattcgtcgttgtttttggtctctcaatcgccgccatttctattctcatgtta
ccggctgatgttgctaaccggcaggcttgtcaacacgcgatttataatggagcgtgtaat
ctcactctccctatgaaacaactatggcttgctatctacattgttgatgctgttctcgtt
ttcttcgtcattccttttgctatgttctactacgaaggcgatcaggataagacaatgggc
aaaaggattaaaagtgcattatgttgggtggtggtcacggcaatcgtctgtgctttgttg
cttggaattttatatgggctcgctggaaaggcagacttcactgtaagacacctttcatca
gccaccactccctttacgaattcatttgattttaacaatggtcaacaatgtattggaaat
ggaagtggtgcccgtcagtgttctgcatattctgctagtgcttcctctgagacaacctgg
actatgcatgctacttttcctgaatatgtcgttgctctggctactattgttggatctgtg
cttttcacgatttttggtggggttggcattgcctgtctccctttgggacttatattttcg
ttcatcaggcgtccaaaggctgttattacacggtcacagtatatcaaggaagctactgag
ctaggtaaaaaagcaaaagaattgaagaaagcaactgatgcacttcatcaagaagaaaga
agcggtagtaagggaagaaaatggcggaagaatgtgaaggcagtcgaaaaggaggtgctt
cttcttgaagatgatgtcaaggctctagaggaaatgtatcctcaaggtgaaaaggctgag
actgcatgggcaatgacggttctaggctacttggcaaaactcatcctaggcattttaggg
ctgattgtctctgtagcttgggttgcccatatcgtgatatatcttctgattgatcctcca
ctttcttctttccttaatgaggttttcatcaaactagatgatatttggggtcttttgggc
actgcagcgtttgcctttttttgcttctaccttttgcttgcggtgattgccggagcaatg
atgcttggcttgaaattagtttttgttacaattcatccaatgaagtggggagctacgctc
atgaactcttttcttttcaatgtgggccttattcttctgtgctctatcagtgtcattcag
ttctgcgccacagcctttgcatactatgctcaagccactgcagctcaagaaatatttggt
cacaatctacaatctcttcgtggaattaagtatctatacaagtacaacgtgtttcaaatt
ggattcattgttttagctggtctgacatttgtttactatgttgcctttgggtggagaagg
aaaaagccgagtgggaggttccagctctccagttaa
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