Solanum dulcamara (climbing nightshade): 129882480
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Entry
129882480 CDS
T09577
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 18 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sdul01002
]
129882480
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129882480
Enzymes [BR:
sdul01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
129882480
Peptidases and inhibitors [BR:
sdul01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
129882480
Ubiquitin system [BR:
sdul04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
129882480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Motif
Other DBs
NCBI-GeneID:
129882480
NCBI-ProteinID:
XP_055812757
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All DBs
Position
1:complement(85963624..85973322)
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AA seq
818 aa
AA seq
DB search
MKMPQANGCAVCGNVTSKRCSRCKRVTYCSEACQRSDWNSGHKYGCRDFQSSVKGNSEQS
ASTLQRRKSFGNSLVPFSGNYNLLNQSKKVLFPYEEFLEFFYWDSPGYPPCGLINCGNSC
FANVVLQCLTQTKPLVAYLLEKDHKKECNCIESNYYDELTLCFKLLVIILYIMYFLSFHP
GRSNDWCFLCEFQQHVEKASWCRYPFSPIGILSVLPNIGGNLSCEKQEDAHEFMRFAIDT
MQSVLLDEFDGDKAVPLSAQETIIQHIFGGHLQSRVQCTKCGNISNQYENMMDLTVEIHE
DADSLEECLDRYSAEECMDGENMYKCDRCDDYVKAWKRLTIRKAPNILTIALKRFQREGF
GKLNKRVIFPENLDLNPNMSEAGDHNDFFQLYAVIVHVDMLNASSYGHYICYIKDFSGNW
YRVDDTEVADVHISVVLSEEAYMLLYSRMTARPTSLYILESLNKEDHAILKAESKQYSPL
QPLECHKTAVCPAMCADPGSLPTDNRSEIVSAEEELSSVTTFEGGKEDQDMVDSGASCRV
LQELQDVGDASADEATYRLRMLSPWSFMDSSDEAVIQKPEGRFLVSDIEEEAETCKGIAY
ESLLGSSREDSVATNGDYRCAKQEVRGEVCQNSTLCDPTNACAQSGLSCEKPKLKPLSTP
PGFLGKRPRDKRPRDKRPRDKCAKQEVRGEACQNSTLCDPTNACAQSGLSCEKPKLKPLF
TPGFLVKRPRDKCAKQEVSGEVCQNSTLCDPTNTCTQSGLSCEKPKLKPLFTPGFLGKRP
RDKCAKQEVRGEVCQNSTLCDPTNACAQSGLSCEKPEK
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgccgcaggcgaatggttgcgccgtgtgcggcaatgtcacatctaaaagatgc
tcacgttgcaagagggttacatactgttctgaagcttgccaaagatccgattggaactcg
gggcacaagtatggatgtagggattttcaatcatctgttaaaggtaattctgagcaatca
gcatcgactttgcaaaggaggaagtcttttggcaattcacttgttccttttagtggaaat
tataatctactaaatcagtcgaaaaaggtactttttccatatgaagaattcttggaattc
ttttactgggacagtccagggtatcctccttgtggactcataaattgtggtaacagctgt
tttgctaatgtggttctgcaatgtctaacacagactaaaccacttgttgcctacttgttg
gagaaagaccataaaaaagaatgtaactgcatcgaatcaaattattatgatgaactaacc
ctttgttttaaattattggttataattctttatatcatgtattttctctctttccatcca
ggtagatcgaatgattggtgcttcctatgcgaatttcaacaacatgttgaaaaggctagc
tggtgtcgctatcccttttcaccaattggcatactatcagtgttgcctaacattggtggt
aatctttcttgtgaaaagcaggaggatgcccatgagtttatgaggtttgctattgacaca
atgcaatcggtgttacttgatgaatttgatggagataaggctgtacctctaagcgctcag
gaaactattattcagcatatatttggtggtcaccttcaatctcgggtccaatgtacaaaa
tgtggtaatatctcaaatcagtatgagaatatgatggatctgaccgtagagattcacgag
gatgctgattctttggaggaatgcttagatcgatatagtgcagaagagtgtatggatggt
gaaaatatgtataaatgtgatagatgcgatgattatgtcaaggcatggaagcgcctaacg
atccggaaggcaccaaatatcctaacaatcgctttgaaaaggtttcagagagagggattt
ggcaaactaaataagagggtgatttttcctgaaaatttagatcttaatcctaacatgagt
gaagcaggagatcacaatgactttttccagctgtatgcagtgattgttcatgtggatatg
ttgaacgcatcatcttatggtcattatatctgctacatcaaggatttcagtgggaattgg
tatagagtcgatgacactgaggttgctgatgttcatatttctgtggttctttcagaggaa
gcgtacatgctcttatatagcaggatgactgccaggccaacatccttatatattcttgaa
tcactaaataaagaggaccatgctatactcaaagcggaaagcaagcagtattccccactt
caacctcttgaatgtcataagacggctgtgtgtcctgctatgtgtgctgatcctggttca
ttgccaactgataatagatcagagattgttagtgcagaagaggagttgtcctcagttacc
acctttgagggtggaaaggaggatcaagatatggtagattctggggcaagttgtagagtc
ttgcaggagcttcaggatgttggagatgccagcgcggatgaagcaacttatcgcctaaga
atgttatctccttggtccttcatggatagttctgatgaagctgtaatacagaaacctgaa
gggagattccttgtttccgacattgaggaagaagccgagacgtgtaaaggaattgcctat
gagtctctgttaggaagttctagagaggattctgtagccacaaatggtgactacagatgt
gccaagcaggaagtcagaggggaagtttgtcagaatagtactctttgtgatccaacaaat
gcatgcgctcagtctggcttatcttgtgaaaagccaaagttaaagccactgtctaccccc
cctggttttcttgggaaacgcccacgcgacaaacggccacgcgacaagcgcccacgtgac
aaatgtgccaagcaggaagtcagaggggaagcttgtcagaatagtactctttgtgatcca
acaaatgcatgcgcgcagtctggcttatcttgtgaaaagccaaagttaaagccactgttt
acccctggttttcttgtgaagcgcccacgtgacaaatgtgccaagcaggaagtcagtggg
gaagtttgtcagaatagcaccctttgtgatccaacaaatacatgcacgcagtctggcttg
tcttgtgaaaagccaaagttaaagccactgtttacccctggttttcttgggaaacgccca
cgtgacaaatgtgccaagcaggaagtcagaggggaagtttgtcagaatagcactctttgt
gatccaacgaatgcatgcgcgcagtctggcttatcttgtgaaaagcctgagaaatga
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