Solanum dulcamara (climbing nightshade): 129882777
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Entry
129882777 CDS
T09577
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG3
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129882777
Enzymes [BR:
sdul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129882777
Ubiquitin system [BR:
sdul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129882777
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
zf-C3HC4
vWA-TerF-like
zf-C3HC4_2
zf-RING_2
Prok-RING_4
zf-C3H2C3
zf-RING_UBOX
Sina_RING
Motif
Other DBs
NCBI-GeneID:
129882777
NCBI-ProteinID:
XP_055813197
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Position
3:complement(70119479..70132671)
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AA seq
420 aa
AA seq
DB search
MGNQESALNDAHGDHYHHSPERVRNQIGSHPQYQPTTYAESSLDSNYRAQATSYAGSSDR
ANYQRNQQASYIADNYKSLDEVVTALREAGLESSNLILGIDFTKSNEWTGKSSFNRRSLH
SVGHTANPYEQAISIIGRTLSPFDEDNLIPCFGFGDATTHDQHVFSFYPDHRPCHGFEEA
LTRYKEIVPYLKLSGPTSFAPIVNAAIDIVEASNGQYHVLVIIADGQVTRSIDTPPGSLS
PQEQATVNSIVAASEYPLSIILVGVGDGPWDEMKRFDDNIPQRAFDNFQFVNFTKIMSEH
SEMDKKETAFALAALMEIPFQYRATQRLQFRESKRGPRTRPFPPPREVIDHDSAVKSLPH
VTSYEPVDSGAAEQVCPICLTNPKDMAFGCGHLTCKECGVTITLCPLCREPIKTRIRLYS
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggggaatcaagagtctgccttaaatgacgctcacggtgatcattatcaccacagccca
gaacgtgtaagaaatcaaattggctcccatcctcaatatcagcctactacttatgcagaa
agctccctcgattctaactatcgagctcaagctacatcatatgccggaagttcagataga
gcaaactatcagaggaaccagcaagcctcttacatagctgataactataaatctttggat
gaggttgttaccgcattgcgagaagcaggccttgaatcgtcgaacttgattcttggcatc
gatttcaccaaaagcaatgaatggacagggaagtcttcattcaacaggagaagccttcac
tcagttggtcacacggctaacccatacgagcaagccatctctattattgggcgaactttg
tctccttttgatgaagacaatttgataccttgttttggatttggtgatgcaaccacacac
gatcagcatgtgtttagcttttaccctgatcatcggccttgccatggatttgaggaagct
ctaacaagatataaggaaattgttccttatctgaaattatcaggtccaacatcatttgcc
ccaatagtcaatgctgcaattgatatagtggaagcaagtaatgggcagtaccatgtcctt
gtcattattgcagacgggcaggtaacaaggagcattgacactccgcctggaagccttagc
cctcaagaacaggctactgtaaattctattgttgctgccagtgaatatcctctttcaatt
attctggttggagttggagatggcccatgggatgaaatgaaacggtttgatgataacatt
ccacaacgggcatttgataacttccagttcgttaattttacaaaaatcatgtctgagcat
tcagagatggacaagaaggaaacagcctttgctcttgctgcactaatggaaattccattt
cagtaccgagccacacaacgccttcaattcagagaaagcaaaagaggccctcggacaagg
ccatttcctcctcctcgtgaagtaattgatcatgacagtgctgtcaaatcattgccacat
gtgacaagctatgaacctgttgactctggagctgcagaacaagtttgtcccatctgcttg
acaaacccaaaggacatggcttttggatgtggtcatttgacatgcaaggagtgtggtgtc
acgataacattgtgtcctttatgtcgagagcccattaaaactcgcataagactgtatagc
tag
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