Solanum dulcamara (climbing nightshade): 129882820
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Entry
129882820 CDS
T09577
Name
(RefSeq) uncharacterized protein LOC129882820
KO
K12817
pre-mRNA-splicing factor 18
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129882820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sdul03041
]
129882820
Spliceosome [BR:
sdul03041
]
Complex C
Other components
Step II factors
129882820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prp18
PRP4
LAGLIDADG_2
Motif
Other DBs
NCBI-GeneID:
129882820
NCBI-ProteinID:
XP_055813260
LinkDB
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Position
3:complement(71751971..71755505)
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AA seq
413 aa
AA seq
DB search
MDILKQELEKRRKNLAQDVGGRKVFKRSEIEQKRLQRIREEEKREAEAKALRQKQLEQQQ
KSTDDSSSKSNSITDIQCLKHDSSSASVSKAPTDEQKIDGLNLPRQEVIRRLRFLKQPVT
LFGEDDEARLDRLKFVLKAGLFEVDDTDMTEGQTNDFLRDIVELKKRQKSGMMSERKRKV
TEDSGEDKDGGGGDDDLSGDGNSSGVDHDKDLKRMKTNFVELCDEDKILVFFKKLLNEWN
QELDEMTDSEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCMKR
DYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKR
LMTFCQRRYPAMPSKAVEFNSLANGSDLQSLLAEEGTSGGSQISEERLRIMPS
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggatatactgaaacaggaattggagaaacgacggaagaatctggcccaagacgtcggt
ggccggaaagttttcaagcggtcggagatcgaacagaagcgcctccagaggattcgcgaa
gaggaaaaacgtgaagccgaagccaaagctctccgtcaaaaacaattagagcagcaacag
aagtctaccgatgattcctcatcaaaatctaactccataaccgatattcaatgcctcaaa
catgattcatcatctgcatcggtttctaaagcacctaccgacgagcaaaagatcgatgga
ttaaaccttcctagacaagaagttattcgacgacttaggtttctgaaacaaccggtgact
ttatttggagaagatgacgaagcgaggcttgatcgtttgaagtttgtattaaaagctgga
ttgttcgaagtggatgatactgacatgactgaggggcaaaccaatgactttttgagagat
attgtggaattgaagaaacggcaaaagtcggggatgatgagtgaaaggaagcggaaggta
acggaggattctggtgaggataaagatggaggaggtggtgacgatgatttgagtggagat
ggcaactcctcgggggttgatcatgataaggatttgaagaggatgaaaacgaattttgtg
gagttgtgtgatgaggataagattttggtgttcttcaagaagctgttgaatgagtggaat
caggagcttgatgagatgactgattctgaaaagcggacggccaaggggaaatcaatggtc
gccacttttaagcagtgtgctaggtacttgcatccattattcaagttctgcaggaaaaag
gtacttcctgatgacattaggcaagcactgcttgtggttgttgaatgctgtatgaagagg
gattatctagctgcaatggatcagtacattaagatggcaattggtaatgcaccttggcct
attggtgttactatggttggtattcatgaacggtcagctcgtgagaagatctacacaaac
agtgttgctcatattatgaatgacgagacaactaggaagtatctgcagtcagttaaaaga
ctgatgacattctgccaaagacggtatccagcaatgccatccaaagctgtggagttcaat
agccttgcaaatggaagtgacttgcagtctctgcttgcagaagaggggacttctggggga
tctcaaatctcagaggaaaggcttcgaataatgccttcataa
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