Solanum dulcamara (climbing nightshade): 129882828
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Entry
129882828 CDS
T09577
Name
(RefSeq) RAN GTPase-activating protein 1-like
KO
K14319
Ran GTPase-activating protein 1
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129882828
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdul03019
]
129882828
Messenger RNA biogenesis [BR:
sdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
129882828
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WPP
LRR_6
LRR_4
LRR_1
Motif
Other DBs
NCBI-GeneID:
129882828
NCBI-ProteinID:
XP_055813267
LinkDB
All DBs
Position
3:72034417..72040431
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AA seq
534 aa
AA seq
DB search
MDSAGFSMKLWPPSLSTRLMLMERMTKNLITPSVLSRKYGLLGKEEAEEDAKQIEALAFD
SANQHFDKEPDGDGSSAVQLYAKESSKLMLEVIKRGPRTKESAEGIAPEKVKASDETIVF
DISKGRRDFISAEEASELLKPLSEPGNNYKRICFSNRSFGVDAAKIAGPILSSLKNQLTE
VDLSDFVAGRQEEEALEVMEIFSSALDACYLRYLDLSNNALGEKGVRAFGALLKSQKNLE
ELYLMNDGISEEAALAVCELLPSTDKLRILHFHNNMTGDEGALAISELAKHSPALEDFRC
SSTRVGSEGGIALSRALGECRNLKKLDLRDNMFGVEAGIALSKVLSIFSGLTEIYLSYLN
LEDEGSIALANVLKGSAPSLEVLEMDGNDITAKAAPALVACIAAKQFLTTLKLGENELKD
EGAILIAKALEDGHGQLTEVDMSTNAIRRAGARCLAQAVVSKPGFKLLNINGNFISDEGI
DEVKDIFKNSLHVLGPLDDNDPEGEDYDEEADEGADNENNLETRLKDLDIKQEE
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggattctgcaggattctctatgaagctgtggcccccaagtctaagtaccaggctaatg
ctcatggagagaatgaccaagaatcttattactccatccgtcttatccaggaaatatggt
cttttgggtaaagaagaagctgaggaggatgccaaacaaatagaagctctggcttttgat
tctgccaatcaacattttgacaaggagccagatggagatggaagttctgctgtgcaactt
tatgctaaggaatctagtaagctcatgttagaagttattaaaaggggccctcggacaaag
gaatctgcagaaggtattgcacctgagaaggttaaagcatctgatgaaactattgttttt
gatatatccaaaggtagacgggatttcataagtgcagaagaggcatctgagttattgaaa
ccattaagtgaaccagggaataattataaaaggatatgtttcagcaatagaagctttggc
gtggatgctgctaaaattgcagggcctattttgtcctctcttaaaaatcaattgacagaa
gttgacctttcagactttgtagcaggtagacaagaggaagaagccctggaagtcatggaa
atcttttcttctgctttggatgcctgttacctgaggtacctcgatctttctaacaatgct
ttaggtgaaaagggcgtaagggcatttggggcacttttaaagtcacaaaagaacttggaa
gagctctatttgatgaatgatggcatttcagaagaagcagcactagcagtttgcgagcta
cttccttcaactgataaactccgtatcctacattttcacaataacatgacaggggatgag
ggtgcactagctatttctgaacttgcgaagcattctcctgcattggaggatttccggtgc
tcatctacaagggtaggatctgaaggtgggattgctctttcacgagcacttggagaatgt
aggaatttaaagaagcttgatttgcgtgacaacatgtttggtgtggaagctggaattgcc
ttgagcaaagtactatcaatcttttcgggcttaactgaaatttacttgagttatctgaat
ttggaggatgaggggtccatagctcttgctaatgtcctcaaaggatctgctccatccctt
gaggttttggagatggatggaaatgacattacagctaaagctgctcctgctctggtggcc
tgtattgctgcaaaacaatttcttaccacattgaagttaggagagaatgaattgaaagat
gagggtgctatcttaattgcaaaggcattggaggatggtcatggtcaattaactgaagtg
gatatgagtaccaatgcaataagaagagctggtgccaggtgcttggcacaagctgtagtg
agcaaacctgggtttaagttgctgaacatcaatggcaacttcatttctgatgaaggaatt
gatgaagttaaagatatttttaagaattcacttcatgtgcttgggccgttggatgacaat
gatcctgaaggagaagattatgatgaagaggctgatgaaggagcagataatgagaacaat
ttggagacgaggcttaaggatcttgatatcaagcaggaagaataa
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