Solanum dulcamara (climbing nightshade): 129882973
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Entry
129882973 CDS
T09577
Name
(RefSeq) fumarate hydratase 1, mitochondrial isoform X1
KO
K01679
fumarate hydratase, class II [EC:
4.2.1.2
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul00020
Citrate cycle (TCA cycle)
sdul00620
Pyruvate metabolism
sdul01100
Metabolic pathways
sdul01110
Biosynthesis of secondary metabolites
sdul01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
129882973
00620 Pyruvate metabolism
129882973
Enzymes [BR:
sdul01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.2 fumarate hydratase
129882973
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Gene cluster
GFIT
Motif
Pfam:
Lyase_1
FumaraseC_C
PyrI
DUF6532
Motif
Other DBs
NCBI-GeneID:
129882973
NCBI-ProteinID:
XP_055813470
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Position
3:complement(75370794..75383161)
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AA seq
490 aa
AA seq
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MAMLIGARRLSAGSDSLRYTCCWRFFSTSFREERDTFGPILVPSDKLWGAQTQRSLQNFE
IGGDRERMPEPIIRAFGILKKCAAKVNMDYGLDQSIGKAIMQAAEEVAEGKLNDHFPLVV
WQTGSGTQSNMNANEVIANRAAEILGHNRGDKHVHPNDHVNRSQSSNDTFPTVMHIAAAM
ELNKRLVPNLKQLHTSLNSKSVEFKDIIKIGRTHTQDATPLTLGQEFSGYATQVKYGIDR
VLCTLPRMYQLAQGGTAVGTGLNTKKGFDIKIAAAVAEETNLPFVTAENKFEALAAHDAF
VETSGALNTVAASLMKIGNDIRFLGSGPRCGLGELSLPENEPGSSIMPGKVNPTQCEALT
MVCAQVMGNHMAVTVGASNGHFELNVFKPMIANSLLHSVRLLGDASASFEKNCVRDIQAN
RERIAKLLHESLMLVTCLNPKIGYDNAAAVAKKAHKEGTSLKDAALNLAVLTSEEFDQLV
VPEKMIGPTD
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgttaataggggctcgtcgattatcagctggatcagattcactgcgttatact
tgttgctggaggtttttctctacgtctttcagggaggaaagagatacatttggtcctatt
ctcgttccatcagacaagttatggggggctcaaactcaaagatcattgcagaattttgaa
attgggggtgatcgtgaaagaatgcctgagccaatcatacgtgcattcggtattcttaaa
aaatgtgcagccaaggtgaacatggactatggccttgaccaatctattggaaaagcaata
atgcaagcagctgaagaggttgcagaaggaaaattgaatgaccattttcctttggtggtt
tggcagactggcagtggtactcaaagtaacatgaatgctaacgaggttattgcaaatcga
gcagctgaaatacttggccataatcgcggagacaaacatgtgcatccaaatgatcatgta
aatagatcgcaatcttcaaatgatacatttcctacggtgatgcacattgctgcagcaatg
gagctaaataaaagattagtaccgaacttgaaacagttgcatacttcactaaattcaaag
tcggtcgaattcaaggacattatcaagattgggcgaactcacacacaagatgcaacacct
ttgactcttggacaagagtttagtggctatgcaactcaagtgaaatatggaatcgataga
gtcttatgcacccttccacgcatgtatcagctcgcacaaggtggtacagcagttgggaca
ggattgaatacaaagaaagggtttgacataaaaattgctgcagcagttgcagaggaaaca
aatttgccatttgttacggctgaaaacaagtttgaagcattggctgctcatgatgcattt
gttgaaactagtggagccttaaatactgtggctgcttcccttatgaagattgggaatgat
atacgcttcttgggaagtggtccccgctgtggtcttggcgagctcagtcttcccgaaaat
gaacctggaagcagtataatgcctggcaaggtaaatcctactcaatgtgaggctctcacc
atggtctgtgctcaggttatggggaatcatatggctgttactgttggtgcatcaaatggc
cattttgagctgaatgtcttcaagccgatgattgctaattctctcctacactcagtaaga
ttgctaggcgatgcatctgcttcctttgaaaagaattgtgtgagggatatccaagctaac
agagagagaattgcaaaattgttgcacgagtcgctcatgctcgtcacatgtttgaaccca
aaaattggttatgataatgctgctgcagttgccaagaaagcccacaaggagggaaccagt
ttgaaggatgctgctctcaatctagcagtcctcaccagtgaggagtttgatcaacttgta
gtccctgagaaaatgattggtccaactgactga
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