Solanum dulcamara (climbing nightshade): 129883134
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Entry
129883134 CDS
T09577
Name
(RefSeq) cryptochrome-1
KO
K12119
cryptochrome 2
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
129883134
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Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
129883134
NCBI-ProteinID:
XP_055813701
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Position
3:complement(78479621..78484869)
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AA seq
645 aa
AA seq
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MESNSKTIVWFRRDLRIQDNPALAAAARNGSVLPVFIWCPKEEGQFYPGRVSRWWLKQSL
IHLKQSLKSLGAELVLIKAQSTLSALTECVDAVGATKVVYNHLYDPVSLVRDHNIKQKLG
ELGISVQSYSGDLLNEPWEVYDDDGKVFTTFDAYWEKSLRIQNEPVSHLPPWRLTQAAGS
VKMCSIEELGLENESEKSSNALLGKGWAPGWSNADKALTEFVENNLLAYSKDRLRVGGNS
TSLLSPYLHFGEVSVRKVFNSVLLKQILWTKEGNSVGKESASIYLRAIGLREYSRYICFN
FPFTHQRSLLNNLRFFPWNADQALFKAWRQGRTGYPLVDAGMRELWATGWVHNKIRVIVS
SFFVKFLLLPWQWGMKYFWDTLLDADLESDIIGWQYISGSLPDGHELERLDNPEVQGFNY
DPEGEYVRHWLPELARMPAEWIHHPWDAPLNVLKAAGVELGMNYPNPIIDVDVARDRLMQ
AIFVMREKEAAVNASDANGTIEVVFDNSENVGDSANIPKDDVVKRKVPCPSSSSYDQRVP
SMQHGCTYKKRPKPEEETKKPKDNRLSYKEERKMSNVDGDLCSTAESSSMKKQMTVSRNS
FSVPRTITMSHDIKSFEDEASSHVKLQKEEEIDTEINPCKNGATT
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggagagcaattccaagacaattgtgtggtttaggagggatttgaggattcaggataat
ccagctttagctgctgctgctagaaatggaagtgttttaccggtgtttatttggtgtcct
aaggaagaagggcaattttatcccggtagagtttcaagatggtggttgaagcaatctctt
attcacttgaaacagtctttgaaatctcttggggctgaacttgtgctgatcaaagctcag
agtacactttctgctctcacggagtgtgtcgatgctgttggagcaacaaaagttgtgtat
aatcatctatatgatcctgtttcacttgttcgtgaccacaatatcaagcaaaaactgggg
gaacttggcatatctgttcagagctacagcggggacttactgaatgagccatgggaagtt
tacgatgatgatggaaaagtttttacaacttttgatgcatactgggagaagtctttgcgt
atccaaaacgaacctgtttcacaccttcctccttggagattaactcaagctgctggatca
gttaaaatgtgttcaattgaggaattgggattggaaaacgagtcagaaaaatctagtaat
gcattactagggaaaggatgggcaccaggttggagcaatgcagacaaggccttaaccgaa
tttgtagagaacaatctacttgcatactcaaaggataggctaagagtcgggggaaactct
acatcccttttgtcaccttatcttcacttcggagaagtaagtgtgaggaaagttttcaac
agtgtgctcttgaagcagatactttggaccaaagaggggaactctgttggaaaagagagt
gctagtatttaccttagagctattggacttcgagagtattctcgctatatctgttttaat
ttcccatttactcatcaaagatcgttactgaacaacctgaggtttttcccttggaatgct
gatcaagccctttttaaggcttggcgacagggtcggactggttacccattagtagatgca
ggaatgagagagctttgggcaactggatgggttcacaataaaataagagtgattgtgtcg
agtttctttgtcaagtttttacttttgccatggcaatgggggatgaagtacttctgggat
acactcttggacgcggatttagaaagtgatattattggttggcaatatatttctggtagc
ttgccagatggtcatgaacttgagcgcctcgataacccagaggttcaagggttcaattat
gatccagagggtgaatatgtcaggcattggctacctgagctagcaagaatgccagctgag
tggatacatcatccttgggatgcaccacttaatgttctcaaagctgcaggggtggaactc
ggaatgaattatccgaaccccataattgatgtagatgttgcgagggatcgtctaatgcaa
gctatatttgtcatgcgagaaaaagaagcagctgtaaatgcctcagatgcaaatggaacc
attgaagttgtttttgataactctgaaaatgttggagattcagccaatattccaaaggac
gacgttgtaaagagaaaggtgccttgcccgagtagttcatcttatgatcagagagtgcct
tcaatgcaacatgggtgcacttataaaaaaagaccaaagcccgaagaagaaacaaagaag
cccaaagataacaggcttagctacaaggaagaaaggaaaatgtcaaacgtggacggtgac
ttgtgctctactgcagaatcctcttctatgaaaaagcagatgaccgtcagcagaaattca
ttttctgtacctcgaacaattaccatgtctcacgacataaaatcctttgaggacgaagca
tcatcacacgtgaagctgcaaaaggaagaagagattgatacggaaatcaatccgtgcaaa
aatggagctacaacgtga
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