Solanum dulcamara (climbing nightshade): 129883330
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Entry
129883330 CDS
T09577
Name
(RefSeq) protein transport protein SEC23 E-like
KO
K14006
protein transport protein SEC23
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129883330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdul04131
]
129883330
Membrane trafficking [BR:
sdul04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
129883330
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
129883330
NCBI-ProteinID:
XP_055813953
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All DBs
Position
3:complement(81409945..81417622)
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AA seq
764 aa
AA seq
DB search
MATEMAQTDPEGIDGVRMTWNSWPRTKVEASKCIIPIASSIQLLRPFPDLPTLPYTPLRC
KTCSSILNPFCRVDFQALIWICPFCFQRNHFPQHYSGISETNVPAELYPQFTTIQYAIQN
PGGHNSPPVYLFVLDTCMLDEELEFAKSALKRVIGLLPDYAMVGFISYGTQVQVHELGFS
DMSKVYVFQGSKELSKDQVLDQLGLGSSSGRKGGGAGMIGGPNHGLTRFLLPASECEYTL
DSLLDELSTDQWPVAPGNRASRCTGVALSVATGLLGACLSGAGARIVALVGGPCTEGPGA
IVSKDLSEPVRSHKDLHKDAAPFFRKAIHFYEELAKQLVSHGHILDVFASALDQVGVAEM
KVAIEKTGGLVVLAESFGHSVFKDSFKRVFEDGEQSLGLCFNATLEINCSKDIKIQGIIG
PCTSLEKKGSAVASTVTGEGNTTAWKLCGLDKNTCLTVFYDVSSSEKSDPSGNINPQLHI
QFLTSYQSPDGQTKLRVTTITRRWLDAAVGSEDLVQGFDQEAAAVVMARLASYKMELEED
FDPTRWLDRNLIRLCSKFGDYRKDDPTSFTLNPCFSLLPQFMFHLRRSQFLQVFNNSPDE
TAYFRMLLYRESISNAVVMIQPTLMAFSFNTLPSPALLDVASIAADRILLLDSYFSIVIF
HGMTIAQWRNLGYQNQPEHQAFAHLLQVPHDEAQALIHERFPVPRLVVCDQHGSQARFLL
AKLNPSATYNNANDMAAGSDVIFTDDVSLQVFFEHLQRLAVQSS
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgaaatggcacaaacagacccagaaggcatcgatggagtccgtatgacatgg
aattcttggccaagaaccaaagttgaagcaagcaaatgtataatcccaattgcttcttca
attcaattgcttcgcccttttcctgatctacctaccctaccttacaccccgctacgttgc
aaaacttgttcatcaatcttaaaccccttttgccgtgttgattttcaagcattaatttgg
atctgtcccttctgtttccaacgtaatcatttccctcagcattattcaggaatttcggaa
actaatgtacctgctgagctttatccccaatttactactattcaatatgcaattcaaaac
cctggtggtcataattcaccacctgtgtatttgtttgtgttggatacttgtatgttggat
gaagaattggaatttgctaaatctgcattgaaaagggtcattgggcttttacctgattat
gctatggttgggtttatatcatatggtacacaggtgcaggtacatgaacttgggttttcc
gatatgtcgaaggtttatgtttttcagggttcgaaggagttgtcgaaagatcaagttttg
gatcagttaggacttggtagtagtagtggtaggaagggtggtggtgctggaatgattggt
ggacctaatcatggtttgactaggttcttgttacctgcttctgagtgtgagtatacactc
gattcgttgctagatgaattgagtacggatcaatggcctgtggcaccgggaaacagagca
tcgcgctgtactggagtggcattgagtgtggcaactggtctgcttggtgcttgtttgtct
ggggcaggtgctcggattgttgcattagtcgggggtccttgcactgaaggacctggcgcg
attgtgtcgaaggatttatcagaacctgttcgttctcataaagatctacacaaggatgct
gcaccatttttcagaaaggccattcatttctatgaggaactcgcaaagcaactcgtcagt
cacggtcacatcttagatgtttttgcttcagcacttgaccaggtcggagtggcagagatg
aaagtagctattgaaaagactggaggactagttgttcttgctgaaagctttgggcattct
gttttcaaagattccttcaagcgtgtatttgaagatggtgaacagtctcttgggctttgc
ttcaatgctacattagagatcaactgctccaaggatattaaaattcaagggatcattggt
ccttgcacatctcttgagaagaaaggatctgctgtcgccagcacagttactggtgagggg
aatactacagcttggaagctctgtggtctcgacaaaaacacttgcttgactgttttctat
gatgtttcatctagtgagaagtcagatccttcaggcaatataaatccgcaattgcacata
cagtttcttacaagttatcagagccctgatgggcaaacaaaactacgagttacaaccatt
actaggagatggcttgatgctgctgtcggctctgaggacttggtgcaagggtttgatcag
gaagctgctgccgtagtaatggctagattggcttcttataaaatggagctagaggaagat
tttgatcccacaaggtggctagatcggaatctgattcgtctgtgttccaagtttggcgat
tataggaaggatgatcccacctctttcactttgaatccctgtttttctttgctccctcag
ttcatgtttcatttgcggcgatcacaatttttgcaagttttcaataatagtcctgatgaa
acagcatatttccggatgctgctctaccgagagagtataagcaatgctgttgtcatgatt
cagccaacactaatggcattttcattcaatacactgccttctccagctttactggatgtg
gcatcaattgctgctgatcgcattcttttgttggattcatatttcagcattgtcatattc
catggaatgacaatagctcaatggagaaatttgggataccagaaccaaccagaacatcag
gcatttgcacatctattgcaagttcctcatgacgaggcccaagcacttatccatgagagg
tttcctgttcctagactagtagtgtgtgatcagcatggttcccaggcaagatttcttttg
gcaaagttgaacccctcagccacatacaataacgcaaacgatatggcagcgggttcagat
gtgatattcactgatgacgtaagtctccaagttttcttcgagcatcttcagcgactggca
gtgcaatcttcttga
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