Solanum dulcamara (climbing nightshade): 129883395
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Entry
129883395 CDS
T09577
Name
(RefSeq) fanconi-associated nuclease 1 homolog isoform X1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
129883395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdul03400
]
129883395
Enzymes [BR:
sdul01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
129883395
DNA repair and recombination proteins [BR:
sdul03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
129883395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VRR_NUC
FAN1_TPR
HIRAN
FAN1_HTH
Sgf11
Cys_rich_KTR
Motif
Other DBs
NCBI-GeneID:
129883395
NCBI-ProteinID:
XP_055814032
LinkDB
All DBs
Position
3:82251801..82265221
Genome browser
AA seq
984 aa
AA seq
DB search
MMLKGRESLIRLIGRRRRFLRCRSLITTSVPQIGSKEDKDEVSTESGNGDEVWVDCPVCG
KKVRGEEPVINSHLDKCLARGTKRKLSQCTLFQLKFCTRPKVTASSIESDLTRTEFSSSA
NDHNIYDLASEMRNSDGSNNKDESSSSSVSLTLTTSTCNIFTRNRVNRVENLDGLLEFDD
ERKLLSGEKSMQIVGLEGFPQHQISDDRIDNITSSPLSLSKNRTPTCVEPLEDDDNSKIL
LDTFIVGRKFADDTELIIGAMVMLSRDFENVKDSNAIKVLTKDTGHSKELGFIPRELAQY
VSPLIDNFQLRFEGHITSIPQHPHAVVPIQIYSSGIASFGEKDSSSLQEFNSFRINAVCA
AEFSKTHPPISAKYQQNLLLLLKEVLKINAHLFTEGEKTLLQAFLSLSDDSQRLFARLYA
RKGPWFRTASISYAEICDYEEAVKGLSEAECVTLFKSIDKLQIGDLKEVLDVLNVGELRD
LLCSLNKSHKKIVQNSDHGTRKQDYVARVLGAYGSGLCPNLPSMILGKTGSCIRISASAE
SVFWRAERLFFLNGEQDLSAFLLVDLGIVKYPAYNCIFTDQIFPDRSDLLSYEEAIEVAQ
VMDESLDENNNELVSRCVEISASHVSSFVEEDISSHFGSMAAFLSCFSASWVYSKVILLG
VSFLEHERRYKDAIDLLKLLLLKFKSDRRRGYWTLRLSIDLEHVGCLDESLEVAEKGLLD
SWVRAGSIVALQRRVLRLGKPPRRWKTPSFSNSVNRKIVEVHVQGRPVNCKTGVKNVFYG
EDGERCGVEELALEYYAGEGGFWQGVHTESGIWLTIFGLLMWDIIFADVPNVFRTKFQTA
PLDLETDSFYEVRRGLVESLLDKIEHGMAEELLIMSWESHVGTACRGVKWDKHSLSELRA
AVTCIGGPCLASICRNLAQDYRSWSSGMPDLLLWRFHDDYRGEAKLVEVKGPRDRLSEQQ
RAWLLFLMDCGFNVEVCKVSHAPV
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgatgctcaaagggcgagaaagcttaatcagattaataggtcggcgccggcgatttctc
cgttgccgctctcttatcactacatctgttcctcagattggttctaaggaagataaggat
gaggtaagcactgaaagtggaaatggtgatgaggtatgggttgattgtcctgtttgtgga
aagaaggttcgaggcgaagaacctgttattaactctcatttagataaatgccttgctaga
ggaactaaacgtaaattgagccagtgcactcttttccaattgaaattttgcacacgacct
aaagttacagcctcatccattgagtcagacttgacaaggactgagttttcttcaagtgca
aatgatcataatatctatgatctggcttctgaaatgagaaactcggatggttcaaataat
aaggatgaatccagttcatcttcagtctcacttactctgacaaccagcacatgcaatatt
ttcaccagaaatagggttaatagagtggaaaacttagatggtctccttgagtttgatgat
gaacgcaaacttttgtctggtgaaaagtcgatgcaaattgtggggctagagggttttcct
caacaccaaattagtgatgatagaattgacaacatcacaagctcgcctttgtcactttct
aaaaacaggactcctacgtgtgtggaacctttggaagatgatgataactctaagattttg
cttgatactttcattgttggccgtaagtttgctgatgacactgagttaattattggagca
atggtgatgctttcaagagattttgagaatgtcaaggattcgaacgcaatcaaggttcta
acaaaagatactggtcacagtaaagagctaggtttcatccccagggaattggcacaatat
gtatctccattgatagacaatttccagttgaggtttgagggccatataacttctattcca
cagcatcctcatgcagttgtcccaattcagatatattcctctggcattgcttcttttggt
gaaaaggactcctctagtctccaagaatttaattcctttcggataaatgctgtatgtgct
gctgaattctccaagactcaccctcctatctctgcaaaataccagcagaaccttctattg
ttactaaaggaggttttgaagatcaatgcacatctttttactgaaggcgagaagacctta
ttgcaagcttttttatcactctcagatgatagtcaaaggctctttgctcggctttatgca
cgtaaagggccatggtttcggacagctagcatatcatatgctgaaatatgtgattatgaa
gaagctgtcaagggtctttctgaagcagaatgtgttactttattcaaatcaattgataaa
ctacaaattggtgacttaaaggaggtattggatgttcttaatgttggtgaactacgggac
cttctctgcagtcttaacaagtcacataagaagattgtccagaactctgatcatggtaca
agaaagcaagattatgttgctcgggttcttggtgcatatggaagtggtttatgccccaac
cttccaagtatgattctaggaaaaactggaagctgtatcaggatatctgcatcagctgaa
tctgtcttttggcgtgccgagaggctattttttctgaatggagagcaggacctgtcagca
ttcttacttgttgacttgggcattgtaaaatatcctgcttacaactgcatattcacagac
cagatttttccagacagaagtgacctattgtcttatgaggaggccattgaggttgcacaa
gttatggatgagtctcttgacgagaacaacaatgagttggtatcaagatgcgttgagatt
tctgcctctcacgtatctagctttgtggaggaagatatatcatcacattttgggtcgatg
gctgcatttttatcttgcttttcagccagttgggtatattctaaggtgatcctgttgggt
gtttctttcctggagcatgaacgtaggtataaagatgcaattgatttgcttaagctgctg
ttacttaaatttaaatctgatcgaagaaggggatattggactctgaggctctcaattgat
ttggagcatgttgggtgccttgatgagagtcttgaagtagctgaaaaggggttgctagat
tcttgggttcgcgctggctctatagtggctctacagaggcgggttctgcggttgggtaag
ccccctagacgttggaaaactcccagtttctcaaattccgtcaataggaagatagttgag
gttcatgttcagggaaggccagtgaactgcaaaacaggggtgaagaatgtcttttatggt
gaagatggagaacgttgtggagtagaagagcttgctcttgagtattatgctggagaagga
ggattttggcagggtgttcacactgagagtgggatttggttgaccattttcgggcttcta
atgtgggacataatattcgcggatgtaccaaatgtcttccgcaccaaatttcagactgca
cctttggatcttgaaactgatagcttttatgaagtcagaaggggtcttgtagaatctctt
ctagataagattgagcatggcatggcagaagagttacttatcatgtcatgggaatcacat
gtgggaactgcctgtaggggagttaagtgggacaagcattccctatctgagctccgagca
gctgttacgtgcatcgggggtccttgtcttgcatcaatctgtcggaatttggctcaagat
tacaggagctggtcaagtggaatgcccgacttattgctgtggcgcttccatgatgactac
agaggtgaagcaaagcttgttgaagtgaaaggccccagagacagactttccgaacaacaa
cgcgcatggttactctttttaatggactgtggcttcaatgttgaggtatgcaaagtgagt
catgccccagtatag
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