Solanum dulcamara (climbing nightshade): 129884045
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Entry
129884045 CDS
T09577
Name
(RefSeq) two-component response regulator ARR14-like
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
129884045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdul03000
]
129884045
Transcription factors [BR:
sdul03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
129884045
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Response_reg
Motif
Other DBs
NCBI-GeneID:
129884045
NCBI-ProteinID:
XP_055814395
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Position
4:16363412..16366019
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AA seq
591 aa
AA seq
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MDIQGVTANSSDMGTKNICILLVLDDFTCHNIVSDMLHNQTYQVLHVGKTMDTLNAIWKR
KSMFNLVLTNIHRLNTNGVDILQIIKNKLYLPIIYFKGLHIFTTVMSPDDTRYDNQVQDS
SVAAYVVNFSDTNEMNKFWQMALEKEKGRKEAPNQEENASRLPQNVTAETIRENTSSADT
DADLKGKRKANSDRSEENRDIEKKRRVVWTPKMHQNFLKAIQHLGYEKAVPKKIVEIMNE
PGLTREHVASHLQKYRMCIKRAQESSAASIYDQILSNDADAKCFQVQPYQSPLNFNASRG
YSHSMQQPFQTHFQQGTGGINCPTSGQMGSFQQQNSLLDFANLQQADHSGLIGQHSTFVP
RIAHGSNFRIYGDKRKNMLFSIQSGNENQPTNSNNSGLEFIGFRLSTDGKSVNFGNKSSS
CTVIPNNAYSGLCSSMSEDYIHKQQSSPQLLETPIENTLSQFSSVQPENHTFNHPCNNNS
EQQSLLLFDNAENKTSCQIPEMPDSFILQEQLSAQPSSGDLEDYSAILFGDEVYVPSLEN
YDSIQQQYSATELPQVTLEVNSLGTEIDIKSLLETTEDRSTQLFWEENELL
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggacattcagggtgttactgccaattcatctgatatgggaactaaaaatatctgcata
cttctagtccttgatgattttacttgtcataatattgtttctgatatgcttcacaaccaa
acttatcaagttttgcatgttggaaaaacaatggatactttaaatgctatttggaagaga
aagagcatgttcaatcttgttcttacaaacatccacaggcttaacacaaatggggttgac
atcctccaaatcatcaagaacaaactctatcttcctattatttattttaaggggttgcac
atttttaccacagtgatgtcaccagatgatacaagatatgacaatcaagtccaagatagt
agtgttgcagcatatgttgtgaatttctcagacacaaatgagatgaacaagttttggcaa
atggcattagagaaagagaaaggtagaaaagaagcacccaatcaagaagaaaatgcttca
agattgcctcagaatgtaactgcagagacaattagagaaaacacatcatctgctgatact
gatgctgatctgaagggtaagcgaaaagctaacagtgacagaagtgaagaaaatagagac
atcgaaaagaaacgaagggttgtatggactccaaagatgcatcaaaacttcttgaaagca
atccagcacttgggctatgaaaaggctgttcctaaaaaaatagttgaaattatgaatgag
cctggattgactagagaacatgttgccagtcatttgcagaaataccgcatgtgtattaaa
agagcgcaagaaagttcagctgcttctatctatgaccaaatcctatcaaatgatgctgat
gcaaaatgctttcaagttcaaccataccaatctcctctaaatttcaatgcttcgcgagga
tattctcattctatgcaacagccatttcagacacactttcagcaaggaactggtggcatt
aactgtccaacttctggccaaatgggcagtttccagcagcagaacagtctcttggatttt
gcaaatttgcaacaagcagatcatagtggcctaattggacagcattcaacatttgtgcca
agaattgctcatggtagtaacttcagaatatatggcgacaagagaaagaacatgcttttc
agcatccaaagtggcaatgaaaaccagcccacaaactcaaataattctggtttggagttt
attggttttagattgagcacagatgggaaatctgtcaactttggtaacaaaagttcctct
tgtactgtaatcccaaataacgcgtattctggtctatgttcctcaatgtcagaggactac
attcacaagcagcaatcttcaccacaactcctggaaacccctatagaaaatactttaagt
caattctcttcagttcaacctgaaaatcatacattcaatcatccttgtaacaacaattca
gaacaacagagccttctacttttcgataatgcagagaataaaacatcatgtcaaatccca
gaaatgcctgacagcttcatactgcaagaacagctttcagcacagccatcatcaggggat
cttgaggactattctgcaatattatttggtgatgaagtatatgtgccatcactagagaac
tatgattctatacagcaacaatattctgcaacagagttaccacaagtaacgcttgaagtc
aatagtttaggtactgaaatagacattaagtctctgctggaaacaacagaagaccgaagt
acacaactattttgggaggagaatgaacttctttaa
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