Solanum dulcamara (climbing nightshade): 129884133 Help Entry 129884133         CDS       T09577                                  Name (RefSeq) protein CHROMATIN REMODELING 5   KO K11367   chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-] Organism sdul  Solanum dulcamara (climbing nightshade) Brite KEGG Orthology (KO) [BR:sdul00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:sdul03021]     129884133    03036 Chromosome and associated proteins [BR:sdul03036]     129884133 Transcription machinery [BR:sdul03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      129884133 Chromosome and associated proteins [BR:sdul03036]  Eukaryotic type   Histone modification proteins    HAT complexes     SAGA complex      129884133     SLIK complex      129884133 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SNF2-rel_dom HTH_Hrp3 Helicase_C Chromo CHD1-like_C HDA2-3 ResIII DEAD Chromo_MIT1 Polyoma_coat2 Motif Other DBs NCBI-GeneID:  129884133 NCBI-ProteinID:  XP_055814458 LinkDB All DBs Position 1:88742202..88767073 Genome browser AA seq 1707 aa AA seqDB search MAFYRNYSNETVTLDDKSQGEQSMQGIHQDVGNEEVEGSLSENDDNGQLQDEVGVEVETA VEDQVPPGRGVNMAGKWGSGFWKDCQPMDPSGRSGSGEESKSGSEYKNEEESDEVSDGRE DQLESEDEGRQKEMEKSRSVPVDEMLSDEYYEQDGDDQSDSLHYKAANPSSGYSSKPQSR PAAASKYASRKAKASKDQDDNEYADYDDDGSEDEDDPDDPDYGSTGRGRGIKDKDDDWEG GESDEVNSDDDEVGISDEDEEYYRKPQGKQKNRGGHSVKSTRVVRSLATSARRKRGRTSY EEEESSEHDSENESDEDFGNKPRRVANLRLKNSVRSSASSVSGRNSEIRTSSRRSVRKVS YAESEESEEIDDSKQKKGQKEELEEEDCDSIEKVLWHQPKGMAEEATRNNKSADPMLLSH LYDSEPDWNEMEFLIKWKGQSHLHCQWKSFVELQNLSGFKKVLNYTKRVMEDVKYRKTVS REEIEVNDVSKEMDLDIIKLNSQVERVIADRISKDGYGNVVPEYLVKWKGLSYAEATWEK DVDIAFGQDAIDEYKAREAAIMVQGKSVDFQRKKSRGSLRKLEEQPEWLKGGKLRDYQLE GLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIHGPFLVVVPLSTLSNWAK EFRKWLPDMNVIVYVGARASREVCQQYEFYNDNKVGRTIKFDALLTTYEVLLKDKAVLSK IRWNYLMVDEAHRLKNSEASLYTTLLEFNTKNKLLITGTPLQNSVEELWALLHFLDPDKF KSKDDFVQNYKNLSSFNEIELANLHKELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQ KQYYKWILERNFQDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDANYFGST KVERIILSSGKLVILDKLLDRLHETKHRVLIFSQMVRMLDILAEYLSIKGFQYQRLDGST KSELRQQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRA HRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGKLEKKETKKGSLFD KNELSAILRFGAEELFKEEKNDEESKKRLLSMDIDEILERAEKVEEKGAEAEEGKELLSA FKVANFCGAEDDATFWSRWIKPEAIAQAEDSLAPRAARNKKSYAEASPLVETNKRKKGVD AQERFPKRRKGDFSCTLPAIDGASAQVRGWSYGNLSKRDATRFSREVKKFGNDSQIDLIS SEVGGAVEAAPTEAQVELFDSLIDGCREAVKGEVVDPKGPLLDFFGVPVKADDLLGRVEE LQLLAKRISRYEDPVSQFRALAYLKPATWSKGCGWNQKDDARLLLGIHYHGFGNWEKIRL DEKLGLMKKIAPVELQHHETFLPRAPQLKERASQLLQMEVAAVGGKNTSLKVGRKSSNKQ KESLPSTTAPLGKGKQSKLSSSGNAKMGRGRAAKGQKKVEPLVKEEGEMSDNEEVYEQFK EVKWMEWCEDVMVYEEKTLKRLQRLQTTSADLPKDKVLAKIRNYLQLLGRRIDQIVFEYE KESHKQERMTVRLWNYVSTFSNLSGEKLRQIYSKLKQEQHVEGRVGPSQFNGSAPAHPTP GFIPRGFDAAKFEAWKRRKRAEADVHSQVQPQHQRTLTNGTRLPEPNLSSGILGAAPLDS KQSVNGRPYRTHQSGMPQRPGFSSGPR NT seq 5124 nt NT seq  +upstreamnt  +downstreamnt atggctttttataggaattattcgaatgaaacggtaacgttggatgacaaaagccaaggg gaacaaagtatgcagggaatacatcaggatgtaggaaatgaagaagtggaaggtagtttg agtgaaaatgatgataatggtcagttacaagatgaagttggtgtagaagtggaaacagct gtggaggatcaggtgccgcctggaagaggagttaatatggctgggaaatggggttctggg ttttggaaggattgtcaacctatggacccctcaggtaggtctggttccggtgaggagtcg aagagtggatcagagtataagaatgaggaagaatctgatgaggtatctgatggtagggaa gatcagttggagtcggaagatgaaggaaggcagaaagaaatggaaaagagtcgcagtgtt cccgtcgacgagatgttgtctgatgaatattatgaacaagacggtgatgatcagagtgac tcgttacattacaaagctgctaacccttcaagtgggtatagttcaaagccgcagtcgagg ccggctgctgccagcaagtatgcaagtcggaaggcaaaagcttcaaaagatcaggatgat aacgagtatgctgattacgacgacgacggcagtgaagatgaagacgatcctgatgatcct gactacggtagcacaggtcgtggaaggggcattaaggacaaggatgatgactgggagggt ggagagtctgatgaggtcaacagtgatgatgatgaggtgggcatctctgatgaagatgaa gaatattacagaaaacctcaaggcaagcaaaagaataggggtgggcatagtgtaaaatct accagagtagttaggtctcttgctacatctgctcgacggaaaaggggtagaacatcatat gaggaggaagaatcatcagaacatgattctgaaaacgagagcgatgaggactttggaaat aaacctagaagagttgcaaatctccgcctgaaaaatagtgttagatcttctgcttctagt gtatctggcaggaatagtgaaatccgaacttcaagtcgtcgatcggttcggaaagtttca tatgcagagagtgaagaaagtgaagaaattgacgatagcaagcaaaagaagggccaaaag gaagaacttgaagaggaagattgtgactcaattgagaaagttttgtggcatcagccaaag ggcatggctgaagaagctacaaggaataacaaatcagctgatcctatgttgttgagtcat ttgtatgactctgaaccagattggaatgagatggagttcttaataaaatggaaaggccag tctcatttgcattgtcaatggaagtcatttgttgagctacagaatcttagtgggtttaag aaggtcttgaattacaccaaaagggtcatggaggatgtaaagtataggaagactgtatcc cgcgaggagatcgaggtaaatgatgtgagcaaggaaatggacttggatatcatcaaactg aacagtcaggttgagagagttattgcagacagaatcagcaaagatggttatggtaacgtg gtgccagagtatttagttaagtggaaagggctatcttatgctgaagcaacttgggagaag gatgttgatattgcttttggtcaagatgctatcgatgagtacaaggctcgtgaggctgcc attatggtacaagggaaatcagtggatttccagcgcaaaaagagcagaggtagtttgagg aagcttgaagagcagcctgaatggttaaagggtgggaaacttcgagattatcagcttgaa ggcttaaattttctggttaacagttggaggaatgatactaatgttatattagctgatgaa atgggcctcggcaaaactgttcagtcagtttcaatgctcggttttctacagaatgctcag caaattcatggaccatttctggttgttgtcccattatcaactctctccaattgggcaaaa gaatttaggaaatggttgcctgatatgaatgttattgtctatgtcggagcacgtgctagt cgtgaggtctgtcaacaatatgaattctacaatgataataaagttggcaggactatcaaa tttgatgcgctgcttaccacttatgaggtacttttgaaggacaaggcagtgctttcaaag ataaggtggaactaccttatggttgatgaagcgcacaggttaaagaacagtgaggcttct ctttatacaacacttttggagttcaacacgaaaaacaagttgcttattactggtactcca ttgcagaacagcgttgaagaactatgggccttactccacttccttgatcctgataagttc aagagcaaggacgattttgttcagaattataagaatcttagttcgtttaatgaaatagag cttgcgaatcttcacaaggaattgaggcctcacattctcaggagggtcataaaagatgtg gagaagtcacttcctccaaagattgaacgaattcttagggttgagatgtcaccgctacag aaacagtattacaaatggatcttggaaaggaattttcaagacttgaataaaggtgttcgt gggaatcaggtttcacttttaaatattgtggtggagttgaagaaatgttgcaatcacccc tttttatttgaaagtgcggaccatggttatggtggggatgcaaattattttggcagcaca aaagtggaaagaattatacttagcagtggtaagcttgttatacttgacaagctgctggac agattgcatgagacgaagcatcgagtgttgatattttctcagatggttaggatgctggat atactggcagaatatttgtctatcaaaggattccaatatcagcggcttgatggtagtact aagtctgagttacgccagcaggctatggaccactttaatgcacctggtagtgaagacttc tgttttcttctgtcgacgcgagctggtggattgggtataaatcttgcaacagcagacact gttattatttttgattctgattggaatccccaaaatgacttgcaggcaatgagtagagct cataggataggacagcaagaagttgtcaacatctacagatttgttacaagtaaaagtgtg gaggaagatatcttggaacgtgctaagaagaagatggttcttgaccatctggtgattcag aaactgaatgcagagggtaaattagagaagaaagaaaccaagaaaggaagtctctttgat aagaatgagctctctgcaatcttgaggtttggggctgaggaattatttaaggaagaaaaa aatgatgaagagagcaagaagaggcttctcagtatggatattgatgaaattcttgagcgg gctgaaaaggttgaagagaaaggagctgaggcagaggaaggaaaggagttgctgagtgct tttaaggttgccaatttctgtggtgctgaagatgatgcaactttttggagtcgatggata aagccagaagctattgcacaagctgaagactctttggctcctcgagctgctcgaaataaa aagagttacgcagaagctagccctctggtggaaactaataaaagaaagaagggtgttgat gctcaggaaaggttccctaagcgtcgcaagggagattttagctgcacacttccggcaatt gatggtgcttccgctcaagtgagaggatggtcttatgggaacttgtcaaaaagagacgcc acacgtttttctcgtgaggtcaagaagtttgggaatgatagtcaaattgacttaatatca tcagaggttggtggggcagttgaagcggcgccaactgaagctcaagttgagctttttgac tcattaatagatggctgtagagaagcagttaaaggtgaagttgttgacccaaagggacct ctcttagatttttttggtgttcctgtgaaggccgatgatctattgggccgtgttgaggaa cttcaactcctagcaaagcgcatttctcggtatgaggatcccgtctcacagttccgtgct ttggcttatctaaagcctgctacttggtctaaaggttgtggctggaaccagaaggatgac gccagactgctactcggaattcattatcatggatttggcaactgggaaaagatacggtta gatgaaaaacttggcctcatgaagaagattgctccagtggaactacaacatcatgagact ttcttgccacgagctccgcagttgaaggagagagcttctcaacttctgcaaatggaagtt gcagctgttggtgggaagaacactagtttaaaagtgggccgtaagtcttccaacaagcag aaggaaagccttcccagcaccacagcacctcttggaaagggtaaacaaagtaaattaagc tcatccggaaatgctaaaatgggtagaggcagagctgcaaaaggtcaaaaaaaggttgaa ccgttggttaaagaggaaggtgaaatgtcagacaatgaggaagtttatgagcagtttaaa gaggtgaaatggatggaatggtgtgaagatgtgatggtatatgaggaaaagacgcttaag cgtcttcaaagattgcagactactagtgctgatctcccaaaggacaaggtgttggccaaa atacggaactacttgcagcttcttggtcgcaggattgatcaaatagttttcgaatatgaa aaggaatcccataagcaagaaaggatgacagtccgtttatggaattatgtctcaacattt tcaaatttgtctggcgagaagcttcgtcagatttattctaaacttaaacaggagcaacat gtagaaggaagggtaggaccatcgcaatttaatggttctgcacctgcgcatccaacgcca gggtttataccccgaggttttgatgcggccaaatttgaagcatggaaacgaaggaaaaga gctgaagctgatgttcattcgcaagttcagccccaacatcaaagaactttgaccaatggt acgcgccttcctgaaccgaacttatcatcagggattcttggcgcagctcctttagatagc aaacagtcggttaatggtaggccttacagaacacatcagtctggcatgccccagagacca ggtttctcatccggtcccagatag

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