Solanum dulcamara (climbing nightshade): 129884196
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Entry
129884196 CDS
T09577
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul00040
Pentose and glucuronate interconversions
sdul01100
Metabolic pathways
Module
sdul_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
129884196
Enzymes [BR:
sdul01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
129884196
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
129884196
NCBI-ProteinID:
XP_055814511
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Position
4:36805129..36807464
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AA seq
407 aa
AA seq
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MAMAISGSSLALILVLSAVVTCKCNAPALVPLADQTIFNVFDFGAKPNSEVISTQAFMKA
WRAACDFNGRARVFVPPGVYTLGEIIFAGPCKGTHPIILQIAGTLKAVPDVSEYSNFAWI
SFESINGVIITGGGTLDAQGQDVWQFNDCKTNPNCVHLPATLHFNDIKNGKVMRLNLINS
MGFHLHITNSYLVRFHGLTIDAPGDSPNTDGIHISKSNSIKLSRSVIRTGDDCVSFGQGT
NNVTVNKVTCGPGHGISVGSLGKLVGELEVRGLIVKNCTMRGTTNGIRIKTYARENPNRA
FGMMFSDIVMENVKNPIIIDQSYGDKSTESSSQVKISDVIYQNIRGTTSSEIAVQLLCSS
RFPCQNVRLTNINLKHISNTPTTSQCQNANVGYTGIQIPSPCHGFSS
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggccatggcaattagtggatcatctttggccctcattcttgtgttgtcagctgtggtt
acctgcaaatgcaatgcacctgctcttgttcctctagctgatcaaactatttttaatgtc
ttcgattttggtgcaaaacctaactcagaagttataagcacacaggcatttatgaaggca
tggcgtgctgcttgtgatttcaatggtagagcaagagtatttgttcctccaggagtatat
acactaggagaaatcatatttgcaggaccatgcaaaggcacacatcctataatacttcaa
attgcaggaaccttaaaggcagtgcctgatgtttctgaatactcaaacttcgcttggatc
tcattcgagtctattaatggtgttattattactggtggaggcactctagatgctcaagga
caagatgtttggcagtttaatgactgtaaaactaatcctaattgtgtccacctacctgcc
accttgcacttcaatgatataaagaacggaaaagtgatgaggttgaatttgataaatagc
atgggatttcatttacatattaccaatagctatttggtaaggttccatggacttacaatc
gatgcccctggagacagcccaaatactgatggaatacacataagcaagtccaactccata
aaactttctaggagtgtcattaggactggcgatgattgtgtttcattcggacaaggaaca
aacaatgtcacagttaacaaagtcacttgtggccctggccatggtattagtgtaggtagt
cttggtaagttggttggcgaattagaagttagaggactcattgtgaagaattgcaccatg
agaggcaccacaaatggtatccgaattaaaacttatgcaagagaaaatcccaatagagca
ttcggaatgatgttcagtgacattgttatggaaaatgttaaaaatccaatcatcatagac
cagagttatggtgacaaatcaactgagtcatcatcgcaagtcaaaataagtgatgtaatt
tatcagaacataagaggaacaacaagcagtgagatagcagttcaactgttgtgcagttca
cgatttccttgtcaaaatgttcgactcaccaacataaatttgaagcatatttccaataca
ccaactacttctcaatgtcaaaatgcaaatgttggctatacaggtatccaaattccatca
ccttgccatggattctcttcatag
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