Solanum dulcamara (climbing nightshade): 129884369
Help
Entry
129884369 CDS
T09577
Name
(RefSeq) DNA (cytosine-5)-methyltransferase CMT3-like isoform X1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul00270
Cysteine and methionine metabolism
sdul01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
129884369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdul03000
]
129884369
03032 DNA replication proteins [BR:
sdul03032
]
129884369
03036 Chromosome and associated proteins [BR:
sdul03036
]
129884369
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
sdul02048
]
129884369
Enzymes [BR:
sdul01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
129884369
Transcription factors [BR:
sdul03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
129884369
DNA replication proteins [BR:
sdul03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
129884369
Chromosome and associated proteins [BR:
sdul03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
129884369
Prokaryotic defense system [BR:
sdul02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
129884369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Chromo
BAH
Cons_hypoth95
Motif
Other DBs
NCBI-GeneID:
129884369
NCBI-ProteinID:
XP_055814654
LinkDB
All DBs
Position
1:complement(89141918..89150984)
Genome browser
AA seq
932 aa
AA seq
DB search
MPSKRKSSPARKPESSSGSRKSKRLAVEKPDPVVAQPSDSDFESEQPVLSTKKKSTRQKT
AESPVVESNNKKLKKLAVEKAESGVASPADSEFVSESNSVTPSKKSTRRAAVKVEPLVDS
VADSDFVDEEDVDETEQGNLKKSLSISPSKRKPKRSEKVKDEQCVLAGDPVPDAEARLKW
PHRYVRKNKGKANGTKNFNGQDDSDQLIQAKCHFSRAEVDDQIYYLEDDAHVKAADDEDD
YICKIVEFFEAVDGMQYFAAQWFYRAKDTVIKSHDQFIDNKRVFLSEIKDDNPIDCLVTK
LKIVPVPSNATLQFKENVKSNCDFYYDMKYLLPYSSFISLPPDTTSPVSSSSTISSDIDA
GEVKEHNLEKKLLDLYSGCGAMSTGLCLGANSKGVKLVTKWAVDLNKHACDSLRLNHPET
QVRNEYASDFLSLLKEWVQLCVSCSLVKSIVPPHPHLKVIDEVEEDSSDDEDEDSSDNKE
GEIFEVEELLEVCYGDPKENNKPGLYFKVRWRGYGPEEDTWEPIDGLSDCPKKIKEFVAK
GFKANLLPLPGDVDVVCGGPPCQGISGFNRFRNKENPMQDPKNKQLDVYMDIVDFLKPRF
VLMENVVDLIKFSNGFLGRYALSRLVGMNYQARMGMMAAGAYGLPQFRMRVFMWGALSSE
KLPQYPLPTHKVIVRGVIPTEFESNTVAYDAGQDLELKKELFLGDALSDLPSVENNEPRD
EMPYTDEPKTDFQHFIRLGRDGVLGSVLYDHRPLQLNEDDHQRVCQIPKRKGANFRDLPG
VRVRPDNKVEWDPDVERVKLPSGKPLVPDYAMSFVGGSSSKPFGRLWWDETVPTVVTRAE
PHNQTIIHPLQDRVLTIRENARLQGFPDYYKLIGPIKERYMQVGNAVAVPVARALGYSLA
MSMKGLSGETPLFSLPKKFPSHEEQNCNEVSQ
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgccgagcaaacggaaatcttctccggcgagaaagccggagtcttcttctggcagcagg
aaatcgaagagacttgcagtagaaaagccagatccagtagtagctcaaccatctgatagc
gattttgaatcggagcaacctgttttatcaacgaagaagaaatccacgagacaaaaaaca
gctgaaagtccagtggtagaaagcaataacaagaagttgaagaagctagctgtagaaaag
gcagaatctggtgtagcttcaccagctgatagtgaatttgtatccgagtctaattcggtg
acgccgagcaagaaatcaacgaggcgagctgcagtaaaggtggaacctttggtggattct
gtagctgatagtgattttgtcgatgaagaagatgttgatgaaactgagcaagggaatctg
aagaagagcttgtcaatatcaccttcaaaaaggaagcctaagagatctgagaaagtgaaa
gatgaacagtgtgtactcgctggtgaccctgttccggatgcagaagctcgactgaagtgg
cctcatcgctacgtaagaaagaataaggggaaagcaaatggtaccaagaattttaatggt
caagatgattctgaccagttaattcaagctaagtgccattttagtcgagcagaggttgat
gatcagatttattatctcgaggatgatgcacatgtaaaggctgctgatgatgaggatgat
tacatatgcaagattgtcgaattctttgaagcagttgatggcatgcagtattttgcagct
caatggttttacagagctaaggatactgttattaaaagccatgatcagttcattgacaat
aagcgtgtattcctttctgaaatcaaggatgataaccctattgattgccttgtgactaaa
ctcaagattgttcctgtgccctcaaatgcaactttacagttcaaggaaaatgtaaaatca
aattgtgatttctactatgatatgaagtacttgcttccatactcttctttcattagctta
ccgcctgacactacaagtccagttagttcatcttctactatatcaagtgacattgatgcc
ggtgaggtcaaagaacacaatctggaaaagaagctcttggatctatattcaggatgtgga
gcaatgtccacggggctatgcttgggtgctaatagcaaaggcgtcaaacttgttactaaa
tgggctgttgacctcaacaagcatgcatgtgacagcttgagactgaaccacccagagact
caggtgaggaacgagtatgccagtgacttcttatcacttctgaaggagtgggtgcagctt
tgtgtctcttgttccttggtaaaaagcattgttcctccacaccctcatttgaaagtaata
gatgaagttgaagaagattccagtgatgatgaagatgaagattccagtgataataaagaa
ggtgaaatttttgaggtggaagaacttttagaagtttgttatggagatccaaaagaaaat
aacaaacctgggctttacttcaaggttcgctggagaggttatggaccggaggaagacacc
tgggaaccaatagatggcttaagtgactgcccgaagaaaataaaagagtttgtggcgaaa
ggcttcaaagcaaatcttttgccattgccgggggatgttgatgttgtatgcggtggacca
ccttgccaaggaatcagtggattcaatcgttttaggaataaagaaaatccgatgcaggat
ccaaaaaataaacaacttgatgtctacatggacattgtggatttcttgaaaccgaggttt
gtattaatggagaacgtggtggaccttatcaaattctccaatggtttccttgggcgatat
gcattgagcagacttgtagggatgaactaccaagcacggatgggaatgatggcagctggt
gcgtatggtcttccacaatttcgtatgcgtgtcttcatgtggggtgctctttcatcagag
aagttgccacaatatccattgcccacacataaagttattgtgaggggtgttattcccaca
gaatttgagtcaaacacagttgcatatgatgcaggacaggatcttgaattaaagaaagaa
ctctttctcggtgatgcactttctgatctcccttcggtggagaacaatgagccaagagat
gaaatgccttacactgatgagcccaaaactgatttccagcattttataagattagggagg
gatggggtgctgggaagtgttctgtatgatcatcgtcctcttcagttgaatgaagatgac
catcagcgtgtatgccaaattcccaagcggaagggtgcgaacttcagggacttgcctgga
gttcgtgttcggccagataataaagttgaatgggacccagacgtggagagggtaaaacta
ccttcggggaagcctttggtccctgactatgctatgagctttgtaggtggtagttcctca
aagccgtttggtcgtttgtggtgggatgaaactgtcccaaccgttgtgacgagagccgaa
ccccataatcagactataatacatccactacaagatagagtgctcacaattcgtgaaaat
gcaaggctccaaggttttcctgactactacaagttgataggtccaattaaagaaaggtac
atgcaagtaggtaatgcagttgctgttccagttgcccgagcattgggctattctttggcc
atgtcgatgaagggattatctggagaaacgccgttgttctcattgccaaaaaaatttcca
tctcacgaggaacaaaattgtaacgaagtgtctcaataa
DBGET
integrated database retrieval system
