Solanum dulcamara (climbing nightshade): 129884444
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Entry
129884444 CDS
T09577
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129884444
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129884444
Enzymes [BR:
sdul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129884444
Ubiquitin system [BR:
sdul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
129884444
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-Di19
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
129884444
NCBI-ProteinID:
XP_055814719
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All DBs
Position
1:complement(89191573..89196426)
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AA seq
310 aa
AA seq
DB search
MAPGGSSYQDIGDSHNAYADYGIAPENAESKSSPFRKSTAINIIGGNHGTRSNTVVHELL
ECPVCINLMYPPIHQCPNGHTLCLKCKSEVHVCPICRHELGNIRCLALEKIAESLELPCR
YQFFGCQDIFTYHSRLRHEQNCRFRPYNCPYAGSECTVSGDIQSLVAHLKDDHKVDMHDG
CTFNHRYVKSNPQDVENATWMLTVFNCFGHQFCLHFEAFNIGVAPVYMAFLRFMGDDDDA
KKFSYSLEVGGFGRKLIWQGVPRSIRDSHKTVRDSLDGLLIQRSMALFFSGGDRKELKLK
VAGRIWREPL
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggcccccggaggcagcagttaccaggatattggtgattcgcataatgcatatgccgat
tatggtattgcacccgaaaatgctgaatcaaaaagctccccatttagaaaatccacagct
attaatattattggtgggaatcatggaacaagatctaatacagttgttcatgagctactt
gaatgccctgtttgtataaatctaatgtaccctccaattcatcagtgtccaaacggtcat
actttatgcctgaagtgcaagtcagaagtccatgtgtgcccaatttgccgtcatgagctt
ggaaacataagatgtctagcattggagaaaattgcagagtcactggagttgccatgccga
taccaattttttggctgtcaagatatattcacttatcatagtaggcttcggcatgagcag
aactgcagatttcgtccatacaactgcccttacgcaggatctgaatgtactgttagtggt
gatattcagtcccttgttgcacacctcaaagatgatcacaaggttgacatgcacgacgga
tgtaccttcaaccatcgctatgtcaaatcgaatcctcaagacgttgagaatgctacatgg
atgttgactgttttcaactgttttggtcaccaattctgcttgcactttgaggctttcaac
atcggagtggcaccagtatacatggcattccttcgttttatgggtgatgatgacgatgca
aaaaaatttagttatagtcttgaagtaggtggctttggcagaaagttgatatggcaagga
gttcctaggagtatccgtgatagtcataaaactgtccgagacagtttagatgggctgctc
attcaaaggagcatggcactcttcttctctggtggtgaccggaaggagctaaagctgaag
gtggccggacgcatttggagagaaccattgtaa
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