Solanum dulcamara (climbing nightshade): 129884568
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Entry
129884568 CDS
T09577
Name
(RefSeq) RING-H2 finger protein ATL54-like
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129884568
Enzymes [BR:
sdul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129884568
Ubiquitin system [BR:
sdul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129884568
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
MASE4
zf-RING-like
Prok-RING_1
TMEM129_C
DUF4227
Motif
Other DBs
NCBI-GeneID:
129884568
NCBI-ProteinID:
XP_055814831
LinkDB
All DBs
Position
4:complement(5687140..5688132)
Genome browser
AA seq
214 aa
AA seq
DB search
MSFHVDRKLIFESLDNSTSKTCGSYYCNPEVYHSRICPLSCFYICQGICLLPEIELPPLP
QNFTTKAPLSQSPHKNTTSIFMIILFTGLGIAVYIFCSFVIHKFRNSRTSSQPEQQVVVV
EEEALSDIRTVGLHPSVISSITIHKYKRGEGLIEATECSVCLSEFQEDETLRILPMCNHA
FHIPCIDTWLRSHTNCPMCRAGIVIMIPTTTAFS
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttcatgttgatcgaaagctaatatttgaatctcttgataattccaccagcaaa
acatgtggcagctattattgcaacccagaggtgtatcattctagaatttgtccactgtca
tgtttttatatttgccagggtatatgtcttcttccagaaattgaactaccaccactacca
caaaatttcacaaccaaagctcctctttcacagtctccacataaaaatactacttccatc
ttcatgataattctttttacaggcttaggcattgctgtctacatattttgttcattcgtc
attcacaaattccgcaactcaagaacttcttcacaaccggagcagcaagtagtagtagta
gaagaagaagcgctaagtgatatacgaacagtgggtcttcacccatcagtcatcagctcc
atcacaatccacaagtataaaagaggtgaagggctaattgaagcaacagagtgctcggtt
tgcttgagtgagtttcaagaagatgaaactcttagaattttgcccatgtgcaaccatgct
tttcacataccttgcattgacacttggctcagatcacacaccaattgtcccatgtgtcgt
gccggcattgtcatcatgatacccactactacagctttcagttga
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