Solanum dulcamara (climbing nightshade): 129885234
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Entry
129885234 CDS
T09577
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129885234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdul04131
]
129885234
Membrane trafficking [BR:
sdul04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
129885234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
Sec7-like_HDS
BIG2_C
DCB
Mon2_C
Motif
Other DBs
NCBI-GeneID:
129885234
NCBI-ProteinID:
XP_055815407
LinkDB
All DBs
Position
4:complement(105049..118840)
Genome browser
AA seq
1727 aa
AA seq
DB search
MSASQALGGPSRCGWVLGPSLDKIIKNVAWRKHSQLVAACKSALDKLDSVVDDPVDPASC
TPLYGLSPSDADFFLQPLIMALDSASPKVVEPALDCSFRLFCLGLIRCEIDTPTPTPTPT
PTPTPTPNPSSRSHIFRLIDSVCKCGALGDEAIELAVLRVLLSAVRSPYVLVRGDCLVHI
VRSCYNVYLGGMNGTNQICAKSVLAQMMIIVFTRVEENSMMVDFKTISVAELLEFTDRNL
NEGSSIQFAQNFLNEIVDVKSKEGIAESKLCLQLENDNSEKKGEPIHGEPGEGADLSGYS
KIREDGFMLFKNLCKLSMKFSSQEHADDNILLRGKVLSLELLKVIMDNAGPIWRSNERFL
NVIKQFLCLSLLKNSALSVMTIFQLLCSIFKNLLSKYRSGLKSEIGIFFPMLILRVLENV
LQPSFLQKMTVLGLLEEISKDPQIIIDVFVNYDCDVDAPNIFERTVNGLLKTALGPPPGS
TTTLSPVQDITFRSESVKCLVTIIKSMGMWFDQQLKVGDPNPDKVSDHEVSEAAISVSEE
GNIDYELHPEANSEFSGAAALEQRRTHKLEIQKGVSLFNRKPSKGIDFLMSTKKIGNSPE
DVASFLKNTTGLNPTIIGDYLGEREEFPLKVMHAYVDSFNFEGMDFGESIRYFLRGFRLP
GEAQKIDRIMEKFAERYCKCNPNSFTSADTAYVLAYSVIMLNTDAHNSMVKDKMTKADFI
RNNRGIDDGKDLPEDYLGVLYDQIVRNEIKMKADSSVPQNKQGNSLNKLLGLDGILNLVW
KQREEKPLGANGVLVRHIQEQFKVKSGKSESIYYVIADPAILRFMVEVCWGPMLAAFSVT
LDQSDDKNATSQCLLGFRHAVHITAVMGMQTQRDAFVTSMAKFTNLHCAADMKQKNVDTM
KTIMSIAIEDGNHLHEAWEHILTCLSRFEHLQLLGEGAPSDSSFFTTSSSESEEKTLKSA
GFPSLKKKGTLQNPTVAAVVRGGSYDSAAVGANSPALVTPEQINNFISNLNLLDQIGNFE
LNHIFAHSQRLNSEAIVAFVKALCKVSMSELQSPTDPRVFSLTKIVEVAHYNMNRIRLVW
SHIWSVLSEFFVAVGLSENLSVAIFVMDSLRQLAMKFLEREELANYNFQNEFLRPFVIVM
QKSNSAEIRELIVRCISQMVLSRVNNVKSGWKSVFMVFTAAASDERKNIVLLAFETMEKI
VREYFRYITETETLTFTDCVRCLITFTNSRFNSDVSLNAIAFLRFCAVKLAEGGLVSNEK
NKTNDSSIPVTDKETSDGLIFSDKDDYMSFWEPLLTGLSRLTSDPRSAIRKSALEVLFNI
LKDHGHLFPRLFWINVFKSVIYPIFSPVNDSPEAQVKYDQSSFKSRYIPPPDGCLWDSET
SVVAAQCLVDLFVNFFDIVRSELPSVVSIMVGFIKGSGKDPAATGVASVIRLAGDLRGKL
CEEEWKVFFLALKEASYSILPSFLKLLRTMDNIEISTSQSENDMETSSGAGLVNDESEDD
NLHTAGYVVSRMKDHIAAQLRIIQVSSDLYKMCRQSISADTVNVLLGIYSAITSHAQQLK
SEKVVQVELQKACSILEISEPPLVFFENESYQNYLNFLHGLLVNNSSFVEEKNIEPELVG
VCEEILRVYLDCAGLNSVKRKPDDKAIYQWNLPLGSAKKEELVARTPLVLSVLRILCSWQ
MDSFRKYISQLFPLMIDLVRSEHSSGEVQRELSHFFQSCIGPIIMTL
NT seq
5184 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcttctcaagcgctaggcgggccttcccgctgtggctgggtactgggtccgtct
cttgataagatcatcaagaacgtcgcctggaggaaacactcgcagctcgtcgccgcctgc
aagtctgctctcgacaagcttgattccgtagttgacgaccctgtcgatccagcttcctgc
acccctctctatggtctctctccttccgatgccgatttcttcttgcaacccctcatcatg
gctcttgattctgcctctcccaaagttgttgaacctgcactcgattgctccttcaggttg
ttctgcttgggcttgatccgctgcgagatcgacacccccacccctacccctacccctacc
cctacccctacccccacccctaacccaagttcccgctcccacattttccgcctaatagat
tccgtctgtaagtgcggggctcttggggacgaagccatcgagctagctgttctcagggtc
ttgctctctgccgttcgatctccttacgtgcttgtcagaggtgattgccttgtccacatt
gttaggtcctgttacaatgtctatctcgggggaatgaatggcaccaatcagatctgcgcc
aagtccgttcttgctcagatgatgataattgttttcaccagagtggaggagaattccatg
atggtggacttcaagaccatctctgtagctgaactcttggagttcacggatagaaatttg
aacgagggaagctccatacagttcgcccagaacttcctcaatgagattgtagatgtcaag
tccaaagaaggcatcgctgaatcaaagttgtgtttgcagttggagaatgacaatagtgaa
aagaagggtgagcccatccacggggaaccgggtgaaggagctgatctgagtggttacagt
aagattagagaggatgggttcatgctcttcaagaatttgtgcaagttgtctatgaagttt
tcatcacaagagcacgcagatgacaatattttgttaagggggaaagtactatcattggag
ctcctaaaggttatcatggataatgctggtcctatttggcgctcaaatgagaggtttctt
aatgttatcaagcaatttttgtgcttgtcgttgttgaagaacagtgcactatctgtgatg
acgatctttcaacttctttgttcaatattcaagaacttattatcaaaatatagatctggg
ttgaaatcagaaattggtatcttcttccccatgctcatcttacgtgtgctggagaatgtg
cttcagcctagtttcttgcagaagatgactgttttgggtttgctggaggagatatctaag
gatcctcagattatcattgatgtatttgtcaactatgattgtgatgtcgatgctcctaac
atatttgaaaggactgttaatggtcttcttaaaactgcacttggtccgcctcctggttcc
actactacgctgtccccagtccaagatattacgtttcgttctgaatctgtgaaatgctta
gtcacaattattaagtcaatggggatgtggtttgaccaacaactgaaggtaggggatcct
aatccagataaggtgtctgatcatgaagtttcagaagctgctatcagcgtcagtgaagag
ggtaacatagactatgagctgcatccggaagcaaattctgaattttctggtgctgctgcc
ttggagcaacgccgtactcataaattagaaatacagaaaggcgtttcactgttcaacaga
aagccctcaaagggtattgatttcttaatgagcaccaaaaagattggcaattccccagaa
gatgtagcttcttttctgaaaaatacaactggattgaatccaaccatcattggtgattat
ctgggtgaaagagaggagtttcctctgaaagttatgcatgcatatgtcgattcttttaat
tttgaaggtatggactttggtgaatcaataagatatttccttcgagggttcagattacct
ggtgaagctcagaagattgaccgtataatggagaagtttgcggagcgctattgtaaatgc
aatcctaactcttttaccagcgcagatacagcttatgtgcttgcttactctgtgataatg
ctcaatacagatgcacataatagcatggtgaaagataagatgacaaaagctgattttatc
cggaataatcgggggattgacgacgggaaggatttacctgaagattatttgggtgttctt
tatgaccaaattgtgagaaacgagataaagatgaaagcagattcttccgtgccgcaaaac
aagcagggtaacagtcttaataagcttttgggcttggatggtatactgaatctagtatgg
aagcagagagaggaaaaaccactgggtgcaaatggagttcttgtgaggcatattcaagag
cagtttaaagtaaaatctggaaaatctgagtctatctattatgtcattgcagatccagct
atattgagatttatggtagaagtctgctggggtcccatgctagctgctttcagtgtcacc
ctagaccagagtgatgataagaatgccacttctcagtgtctgctagggttcaggcatgct
gtgcacattacagctgtgatgggtatgcagacgcagagagatgcttttgtcacctctatg
gcaaagttcactaatcttcattgtgcggccgatatgaaacaaaagaatgttgatacaatg
aaaacaataatgtcgattgccattgaagatggaaatcatcttcatgaagcgtgggagcat
atattgacatgtctatctcgatttgagcatctgcagttgctgggggagggcgcgccatct
gattcctccttttttactacctcgagctctgaatctgaggaaaaaacattgaagtcagct
ggatttccatcactgaagaaaaaagggacactccagaatccaactgttgctgctgttgtt
cgagggggttcatatgacagtgcagccgtcggagctaactctccagcattggtgactcca
gaacagataaataacttcatttcaaacttgaacttacttgatcagatcggcaactttgaa
ctaaatcacatatttgctcatagccaaaggctgaacagtgaagcaatagtagcttttgtc
aaggccctttgcaaagtttcgatgtcagaactacagtctccaacagatccccgtgtattt
agccttacaaaaattgttgaagttgcgcactataacatgaaccgtatcagattagtgtgg
tcccacatatggagtgttctttcagagttctttgtggctgttggtttgtcagaaaatctt
tcagttgcaatttttgttatggactcattacgacaacttgctatgaagtttttagaacga
gaggaactggcgaactacaactttcagaatgaatttttgagaccatttgttattgttatg
cagaaaagtaattctgctgaaatcagggagttgatagttcgttgtatttctcaaatggtt
ctgagtcgtgtcaataatgtaaaatctgggtggaagagtgtttttatggtttttacagct
gctgcttcagatgaaaggaagaatattgtgttgctggcctttgaaaccatggaaaagatc
gtgcgggaatattttcgttacatcaccgagactgaaacattgacttttactgattgtgtt
agatgcctcatcaccttcacaaacagcagattcaacagtgatgtcagcctcaatgctatt
gcttttctccgtttctgtgctgtcaaacttgcagaagggggccttgttagcaacgagaaa
aacaaaactaatgattcatccattccagtgactgacaaagaaacttcagatgggctaatc
ttctcagataaggatgactatatgtctttctgggagcctctgctcacagggttatcaaga
ttgacttcagatcctcgatcagctattaggaagagtgcattggaagttctgttcaacatc
ttgaaggaccacggtcatctcttcccacgcctattctggattaatgtcttcaagtccgta
atctacccaatattcagtccagtaaatgatagcccagaagctcaagtgaagtatgaccag
tcctcattcaaatccagatacataccaccaccagatggatgtttatgggactctgaaact
tctgtggtggcagctcaatgtttggtggatttatttgttaatttctttgatatcgtgagg
tcagaattgcctagtgtagtctctataatggtaggatttataaaaggttctggcaaggat
cctgcagccactggagtagcttctgtaattcggttggcaggtgatttgagaggcaaatta
tgtgaagaggaatggaaagttttctttctagctctgaaagaagcttcatattccattcta
cccagttttctgaagcttttgagaacaatggacaacattgagatatctactagtcagtct
gaaaatgatatggaaacatcttctggggctggattggtaaatgatgaatcagaggatgac
aacctgcatactgcggggtatgttgtttccaggatgaaggatcatatagcggctcagttg
cgcatcatacaggtgtcgtctgatctctacaagatgtgtcggcaatcaatatcagctgat
actgtcaatgtcctccttggaatctattcagctatcacttctcatgcccagcaattgaaa
tctgagaaagttgtacaagtggagctgcaaaaagcatgttctatccttgagatatcagaa
cctcctctggtattttttgaaaatgagtcctaccagaattacctcaatttcttgcatggg
ctgcttgtgaacaattcatcatttgtcgaagagaagaatatagaaccagaacttgtgggt
gtatgtgaagaaattctacgtgtatacttggactgtgctgggttgaactctgtcaagagg
aaaccagatgataaggcaatataccagtggaatcttcccttgggttcagcgaagaaggaa
gaactggtagcaaggactcccttggttctgtcagtactacgcattttgtgcagttggcaa
atggattcttttaggaagtacatttctcagttgttcccattaatgatagatctcgttcgg
agtgagcatagctcaggtgaggttcagcgtgaactaagccattttttccaatcttgtatc
ggccccattattatgacattgtga
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integrated database retrieval system
