Solanum dulcamara (climbing nightshade): 129885252
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Entry
129885252 CDS
T09577
Name
(RefSeq) probable galacturonosyltransferase 3
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul00520
Amino sugar and nucleotide sugar metabolism
sdul01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
129885252
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sdul01003
]
129885252
Enzymes [BR:
sdul01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
129885252
Glycosyltransferases [BR:
sdul01003
]
Polysaccharide
Structural polysaccharide
129885252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
Motif
Other DBs
NCBI-GeneID:
129885252
NCBI-ProteinID:
XP_055815437
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All DBs
Position
4:339179..344963
Genome browser
AA seq
677 aa
AA seq
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MEARFRGSFISSTLLIFFFLVAPSRAELSNVSSLRGELKGLFPSYDCPQCINREEQGRIS
AARPDEKNIDILVTYTDANGAVRTRSINSKDLSTSWVWRYPSDEDGDHKKSSKEVKEKSQ
KPDKPEGTIEHSNGNENQYGVIVEHKSVYELHPIKLRRQRLRNERRERRTAELIQQDKEI
ENQIQDAAIERAKELDTTSKGKYNIWRKEYENPNSDSTLKLMRDQIIMARAYATIAKAKN
EDSLYDSLINHSRESQLAIGEATSDSELQPSALDRAKDMGHVLAAAKDQLYDCMTLARKL
RVMLQSAETGLNLLKKRSAFLIQLAAKTVPRPLHCLPLLLTTDFFIRRYEEKEFPNKEKL
EDPSLFHYAIFSDNVLATSVVVNSTILHAKEPEKHIFHIVTDKLNFPAMKMWFLVNPPAA
ATIHVENVDEFTWLNSSYCPVLRQLESARMIEYYFKAHQSNSLTSGTDNLKYRNPKYLSM
LNHLRFYLPEVYPKLEKILFLDDDIVVQKDLTPLWSVNLQGMVNGAVETCKESFHRFDKY
LNFSNPKISENFDPNACGWAFGMNVFDLKEWRRRNITGIYHHWQEMNEDRTLWKLGTLPP
GLITFYNLTYPLDRSWHVLGLGYDPALNKTEIQNGAVVHYNGNYKPWLDLAIAKYKAYWS
RYVMFNNSYLQLCNISE
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggaggctcgttttagaggatccttcatctcctctactttgctaatcttcttcttcctg
gttgcaccttcccgagcagaattgtcaaatgtatcatcacttcggggagagctgaaaggt
cttttcccctcatatgattgtccgcaatgcattaatagagaggaacaaggtcgaatcagt
gctgctcgtcctgatgagaaaaatattgacatccttgtaacatatactgatgctaatggt
gctgttagaactaggagcataaactccaaggacttgtcaacttcatgggtatggaggtat
cctagtgatgaggatggtgatcataagaagagttccaaggaagtgaaagagaagtctcag
aaaccggataagcctgagggcactattgagcactctaatggaaacgaaaatcagtatgga
gttatcgtggagcataaatcagtatatgagctgcatccaatcaaactcaggcgccagagg
ctaagaaacgaaagaagagaacggcggactgcagagctgatccagcaagataaggaaatt
gaaaaccaaattcaagacgctgctattgagcgagctaaagagcttgacacaactagcaag
ggtaaatacaatatatggaggaaagaatatgaaaaccctaattctgactctacccttaaa
cttatgcgtgaccaaatcatcatggcaagagcttatgctaccattgcaaaagctaagaat
gaagattctctatatgattctttgataaatcattctagagaaagccagcttgcaattgga
gaagccacttctgattctgaacttcaaccaagtgcacttgatcgagctaaggatatgggc
catgttttagctgctgcgaaggatcaactatacgattgcatgacactagcaaggaaacta
agagtcatgcttcagtcggccgaaactggtctaaatctgctgaagaaaaggagtgcattc
ttgatacagctggctgctaaaacagttcccagacctttgcattgtcttcctttgcttctc
acgacagacttctttatacgtcgatatgaagagaaagaatttccgaacaaggaaaagctt
gaagatccttctctgtttcattatgcaatattttctgataatgtacttgccacatctgtt
gttgtgaactctactatattgcatgcaaaggagcctgaaaagcacattttccatatagtg
acagataaattgaacttcccagctatgaaaatgtggttccttgtcaatcctcctgctgct
gcaacaattcacgttgagaatgtcgatgaatttacatggcttaattcctcttactgccct
gtactacgtcagcttgaatctgctagaatgatagagtattatttcaaggcacatcagtcg
aattcccttacatctggcaccgacaatcttaaatataggaacccaaagtatttgtcaatg
ctgaatcatcttaggttttaccttcctgaagtgtatccaaagctagagaaaatcttattt
ctggatgatgatattgttgttcaaaaggatctgacacctctttggtctgtcaacctacaa
gggatggtcaatggtgccgtggagacatgcaaagaaagctttcatagatttgataaatat
cttaacttctctaacccgaagatatctgaaaactttgatccaaatgcctgtggatgggct
tttggcatgaatgtctttgatttgaaggagtggaggaggcgcaacattacaggaatatat
catcattggcaagaaatgaatgaggatagaacactttggaaacttggcaccttacctcca
gggttaataactttctataacttgacttatcctttggatcggagctggcatgtcttgggt
cttggttatgatcctgccctgaacaaaacagaaatacaaaatggggcagttgttcactac
aatggaaattacaaaccatggttggatcttgcaattgccaaatacaaagcttattggtct
agatatgtaatgttcaataattcatatcttcaactttgtaacatcagtgagtag
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