KEGG   Solanum dulcamara (climbing nightshade): 129885386
Entry
129885386         CDS       T09577                                 
Name
(RefSeq) tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
  KO
K05544  tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
Organism
sdul  Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sdul03016]
    129885386
Enzymes [BR:sdul01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.89  tRNA-dihydrouridine47 synthase [NAD(P)+]
     129885386
Transfer RNA biogenesis [BR:sdul03016]
 Eukaryotic type
  tRNA modification factors
   Dihydorouridine synthases
    129885386
SSDB
Motif
Pfam: Dus zf-CCCH_DUS3L zf-CCCH zf-CCCH_4 zf_CCCH_4 zf-CCCH_2 zf-CCCH_PARP12
Other DBs
NCBI-GeneID: 129885386
NCBI-ProteinID: XP_055815614
LinkDB
Position
4:complement(1632840..1637717)
AA seq 701 aa
MENETLMEVSPATSAVEQPETPLQLPSSNTDDSGVSQEFRTPEELVAKGIVPVKRQYLRP
PPSRPSSNNNNNNSTVGVQNDDAAEAKSVPILKDKKSKRQIKRERRQELKSPLHLCPVVA
KSGKVSACPYNDKCRFSHDVEAFKAEKPADIEGSCPFLVYEGPCPYGLACRFAGTHRDDA
SAPTENLPGKSSELNFFNKDTQKLLWKNKMKFPKAEATLKLLGLKGNPKDKKLADKRENG
QVVPKEPAMDTKTDRKEVANNSISPSISPEDDVDENNLADDTRPLKKAKSSVDEICSSQV
SSGSSAQGGVLDSNCDVNTSEPTADVMTDSDKSLKLHPREKKLIDFRDKLYLAPLTTVGN
LPFRRVCKVLGADVTCGEMAMCTNLLQGHASEWALLRRHSSENLFGVQICGAYPDTVTKT
VELLEQECSVDFIDINMGCPIDVVVNKGAGSALLTKPTRMKSVVEAASSAVGTPVTIKVR
TAYFEGKNRIDSLIADMGSWGATVVTIHGRSRQQRYSKLADWDYVYQCVRKAPKSLQVLG
NGDVFSYLDWNKHKTECPELSTCMIARGALVKPWIFTEIKEQRHWDITSGERLDILKDYA
RFGLQHWGSDSKGVETTRHFLLEWLSYTCRYVPVGLLDVIPQRINWRPPSYFGRDDLETL
MASDSAADWVRISEMLLGKVPSGYSFAPKHKSNAYDRAENG
NT seq 2106 nt   +upstreamnt  +downstreamnt
atggaaaacgaaaccctaatggaggtgtcgccggcgacgtctgcggtggagcagccggaa
actccactgcaacttccttcatcgaacaccgacgacagtggagtgagtcaagaatttaga
accccagaggagttggtagctaaaggcatagttcctgtaaagagacagtatcttcgccct
ccaccttccagaccttctagcaataacaacaacaacaatagcactgtcggagtccaaaat
gatgatgcagctgaggccaaaagcgttcctattcttaaggacaagaaatccaaacgccaa
attaagcgcgaacgccgtcaggaattaaaatctccattgcatctctgtcctgtggtggcc
aaatctggaaaagttagtgcttgtccatataatgacaaatgccggtttagtcatgatgtg
gaagcttttaaagctgagaaaccagcggatatagagggtagttgtccatttctggtgtat
gaagggccatgtccttatggattggcttgtaggtttgcagggactcacagagacgatgct
tcagctccaactgagaatttgcctgggaagagttctgaactaaattttttcaataaggat
actcagaaacttctgtggaaaaacaaaatgaagtttcccaaggctgaagccactctcaaa
cttcttggacttaagggcaatcctaaagataaaaaattggctgataaaagggaaaatggc
caagtcgtgccaaaagagccagccatggacaccaaaacagacaggaaagaagttgctaat
aacagtatcagtccttccatttcaccagaagatgatgtagatgaaaataatttggctgat
gatactagacctttaaagaaggcaaagtcatctgtcgatgaaatttgttcctcccaagtt
agcagtggttcaagtgcccaagggggagttcttgatagcaattgtgatgtgaatacatca
gagccaactgctgatgtgatgacagattctgataaaagccttaaattgcacccccgtgaa
aaaaagcttattgattttcgagacaaactctatcttgctcctttgaccacagttgggaat
ctgccttttcgtagagtttgcaaggtgctaggagctgacgtaacatgtggagagatggca
atgtgcacaaatctcttgcagggccatgcatctgagtgggcactgctgagacgacattca
tccgaaaatttgtttggtgttcagatttgtggggcatatccagacactgttacaaagaca
gttgagcttttagagcaagaatgctctgtggatttcattgatattaacatgggatgccca
attgatgttgtcgttaacaagggtgctggatcagctcttcttacaaaaccaacacggatg
aagagtgtagtagaagctgcttcttcagcagttggtacaccagtaactatcaaggtacga
actgcttattttgaggggaaaaatcgcattgattctctaatagcagatatgggtagttgg
ggtgcaactgtagtaaccatacacggccgatcacgtcaacaacgctacagtaagcttgct
gactgggattacgtttaccaatgcgtacgaaaggcccccaagtctttacaagtccttgga
aatggtgatgtattttcttatttagactggaacaagcacaaaactgagtgtcctgagctt
tctacatgtatgattgctcgaggtgcattagtaaagccatggatatttaccgaaatcaag
gaacagaggcactgggacattacatctggcgagcggctagatatcttgaaggattacgca
cgatttggccttcaacactggggttccgattcgaaaggagtggaaacaaccaggcacttt
ttgttggagtggcttagctacacatgtcggtatgttccagttggcctgttagatgttatc
ccacaaagaataaattggcggccaccctcatacttcggtagggatgacctcgagacacta
atggcctctgattctgctgctgactgggtaaggatctctgagatgttactcggcaaggtt
ccgtctggctattcgtttgctccaaaacacaagtccaatgcttatgacagagcagagaac
ggctaa

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