Solanum dulcamara (climbing nightshade): 129885458
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Entry
129885458 CDS
T09577
Name
(RefSeq) SWI/SNF complex subunit SWI3D isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129885458
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdul03021
]
129885458
03036 Chromosome and associated proteins [BR:
sdul03036
]
129885458
Transcription machinery [BR:
sdul03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
129885458
Chromosome and associated proteins [BR:
sdul03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
129885458
PBAF complex
129885458
GBAF(ncBAF) complex
129885458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
ZZ
Myb_DNA-bind_6
TetR_C_26
Motif
Other DBs
NCBI-GeneID:
129885458
NCBI-ProteinID:
XP_055815714
LinkDB
All DBs
Position
4:complement(2552928..2562443)
Genome browser
AA seq
946 aa
AA seq
DB search
MEEKRKDTGTPPPPAADTPMMSADVPSAEAPTSRRRGGGHKRKASAIGSGASSTPPSTLS
KRQVREKQSAVPFPPIHNGPLTRARQQPNNAAAAAASATSPSGFGVRIESEVLPKDEVGV
EEVVKADKESNQVNEDLEAEIEAEIESIRSRDRNVHVVPIHAGWFSWTEVHPLEKRTMPS
FFNEKLQSRTPEVYMEIRNWIMKKYHTDPNIQIELNDLSELSAGDLDVKQEVMEFLDYWG
LINYHPFPQTNSVMNVDIDGDEAAKTDSLIDKLFRFESDETWTPVLPRSSVATPSASSGF
FPESAIAEELMKSEGPAVEYHCNSCSADCSRKRYHCQKEADFDLCSECFNNGKFGSGMSP
SDFIVMEPGESGGASGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFIEM
PIEDTFLDTDAESNKCVEEKEDAVLSKDDISASIDAPETTESKDDGNGNQLSSTVETSKP
ENVNGPTPQEEVGENCAINALRDAFAAVDFYPPPGERASFAEAGNPVMAVAAFLVKLVES
KRVNASVRSSLKSMPGNPSGEKLALRHCFVLEDPPDDGKTSSDTDRPANGSVDPEDKKDE
DDSVEMQKEEKLTSVIDEKSLSIGQEETKGETSIDKKCEEQDGENHEEKNEKELEEAAHL
VSTSDENPEKSDTSKQSGPIPTDKEGEPASLKEPDDAGLAVGQTPSTTAESDVLTSKLEL
PPGFEKESVDGALMDIPSDSPDTPKDEDMMPAVQTKEPEQSMKSNSVLENGENTGAGEVK
GTVDGRKDPLKTKNDLDIDKIKRAAVTALSAAAVKAKYLADQEEDQIRLLTIALIEKQLH
KLECKITFFHEMDNVVMRVRELLERSKQRLLHERSQILKSRYPAHPVPQSVPANRPGMTL
ANSAPRLLTAMSSQRIPNSRPIMAGTPTPSSFMPTTVSGNSMQPSK
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaaacggaaggacaccggaactccaccaccgccggccgccgacacgccgatg
atgtcggctgacgttccgtcggctgaggcacctacgtcgcgtcggagaggtggtggccac
aaacgaaaagcaagcgccattggaagtggcgccagttcgactcctccctcaactttgtcg
aagcgtcaggtgcgtgagaagcagtcagcagtaccttttccaccgatccacaatggtcct
ctcacaagagctcggcagcagccaaacaacgctgcagctgcagctgccagtgctacttct
ccgtcaggttttggtgttaggatcgaatcggaggtgctgccaaaggatgaggtcggtgta
gaagaggtggtgaaggctgacaaagaatcaaatcaagtgaatgaggatttggaggctgaa
attgaagctgaaattgagtcaattagatcccgagatcgtaatgttcacgttgtgccgatt
catgctggttggttctcttggacagaggttcatcctttggagaagcggacaatgccgtca
ttcttcaatgagaagttgcaaagtaggactccagaagtatacatggagatacggaattgg
atcatgaaaaagtatcacaccgaccccaatattcaaattgagttgaatgatctgtccgag
ctctcagcaggagatttggatgtaaaacaggaagtgatggagtttttggactactggggt
ttaattaattaccaccctttcccacaaaccaattcggttatgaatgttgatattgatggg
gacgaggcagcaaagacagattctttgattgataaactgtttcgattcgaatcggatgaa
acatggaccccagttcttccgaggtctagtgtagctactccttctgcgtcttctgggttc
tttccagagtcagctattgctgaagaactgatgaagtctgaagggccagctgttgagtac
cattgcaactcttgctcagctgactgctcaagaaagcggtatcattgccaaaaggaggca
gactttgacttgtgtagtgaatgcttcaacaatgggaagtttggatctgggatgtcccct
tcagatttcattgttatggagcctggtgagtctggtggtgcaagtggtgggaagtggaca
gatcaggagactcttcttctccttgaggcattagagctttataaggaaaactggaatgag
attgctgagcatgtggctacgaagaccaaagctcagtgtattctgcacttcattgaaatg
ccaatagaggatacgttcctggatactgatgctgaaagtaacaagtgtgttgaagaaaaa
gaagatgcagttttgtctaaagatgatatatcagccagtattgatgctccagaaacaaca
gagagtaaggatgatggaaatggcaatcagctttcatccacagtggaaacatcaaaacca
gagaatgtgaatgggccaactcctcaggaggaagttggtgagaactgtgcaattaacgca
ctgagggatgcatttgccgctgttgatttttatcctccacctggagaacgtgcttcattt
gctgaagctggcaatcctgtaatggcagtggccgcgttcctggtgaaactggtagaatct
aaaagggttaatgcctcagtgcgcagctctttgaaatccatgcctggtaatccttctggt
gagaaactagccttaaggcactgttttgttttggaagatccaccagatgatgggaagaca
tcatctgatacagatagacccgctaatggatcagttgatccagaagataagaaagatgag
gatgacagtgttgaaatgcagaaagaggaaaagttgacatcagttattgatgagaagagt
ttgtcaattggacaagaagagaccaaaggtgaaacaagcattgacaaaaagtgcgaagag
caggatggtgaaaaccatgaagagaaaaatgagaaggaacttgaagaagcggctcatttg
gtttctacgagtgatgaaaatccagagaaatctgatacttcaaaacaatctggtccaatt
cctactgacaaagaaggggaacctgcatcacttaaagaaccagatgatgcaggcttggca
gtgggacagacaccaagtacaacagcagaatcagatgttttaacgtctaaactagagctc
ccacccgggttcgaaaaggagtcagttgatggagctttgatggacattccttctgactct
ccagatactcctaaagatgaggacatgatgcctgctgtgcaaacaaaggagcctgagcaa
tccatgaaatcgaattctgtacttgaaaatggcgaaaatacaggggctggagaagtcaaa
ggcactgtagatgggagaaaagatcccttgaagaccaaaaatgatctggatattgataag
atcaaacgtgcagcagtcactgctttgtcagctgctgcagtcaaggcgaaatatctggca
gatcaagaagaggaccaaattcggctgcttactatagcattaatagagaagcagttacac
aagctggagtgcaagataaccttctttcatgaaatggataatgtggttatgagggtcaga
gaactgttggagaggtcaaaacagaggcttctccatgagcgtagtcaaatacttaaatca
agatatccagctcatcctgtgccacaatcagtacctgctaaccggcctggaatgactctt
gctaattcagcacctaggcttctaactgcaatgagctcccaaaggataccgaattcaaga
cccataatggcaggaactcctacaccaagctcttttatgcctacaacagtttcaggaaat
tcaatgcagccttcaaagtag
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