Solanum dulcamara (climbing nightshade): 129885478
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Entry
129885478 CDS
T09577
Name
(RefSeq) probable E3 ubiquitin-protein ligase ARI2 isoform X1
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129885478
Enzymes [BR:
sdul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
129885478
Ubiquitin system [BR:
sdul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
129885478
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ariadne
IBR
UBA_ARI1
IBR_2
IBR_1
zf-RING_UBOX
zf-RING_2
FlxA
Motif
Other DBs
NCBI-GeneID:
129885478
NCBI-ProteinID:
XP_055815738
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All DBs
Position
4:2762753..2770865
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AA seq
590 aa
AA seq
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MEDYGSSDEDIYSSDQDSLEGLENEEADSQWGSSTGNSCKVITRESLLVAQREDLRRVMD
LLSLREHHARTLLIHYRWDVERLFAVLVEKGKTCLFAEAGVTVLEEVDVDLSVSSSTVMC
DICMEEVAGSEVTKMDCGHCFCNDCWTEHFIVKIKEGQSKRIKCMAHKCFAICDEAVIRK
LVSRRHPDLADKFDRFLLESYIEDNKMVKWCPSIPHCGNAIRVETDEFCEVECSCGLQFC
FSCLSEAHSPCSCWMWELWTKKCRDESETVNWITVHTKPCPKCHKPVEKNGGCNLVSCIC
GQAFCWLCGGATGRDHTWSSIAGHSCGRYKEDQEKKSERAKRDLYRYMHYHNRYKAHTDS
FTQESRLRETIKEKVANLESRDSRLRDFSWVTNGLYRLFRSRRALSFSYPFAFYMFGDDL
FKDEMTNEEKEIKQHLFEDQQQQLEANVEKLSKVFEDPFDDYEETRVMEMRMQVLNLSVV
TDTLCKKMYECIETDLLGALQFSCHNIAPYQSKGIERATELNGGWSAKANNNITCQKAHD
QTHGGSIELVQPSGCGTSDESGCSSRKRTRTDSSGGFFDLNLPAELIDRN
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggaggattacgggagcagcgacgaagatatatattcatctgatcaagactctctcgaa
ggactagagaatgaggaggctgattctcaatggggctcttccacaggaaattcctgcaag
gtaatcacaagggagtctctcttggtggcacagagagaagatttgcggagagtgatggac
ctgctctcgctaagagaacaccatgcaagaaccttgctcattcactaccgttgggatgtt
gagaggttgtttgcggttcttgttgagaagggaaaaacttgcttatttgctgaagcaggg
gtaactgttcttgaagaagttgatgttgacttgtctgtgtcttcttcgactgtgatgtgc
gatatatgcatggaagaggtagcagggagtgaggtcacgaaaatggactgtggtcactgc
ttctgcaatgactgttggacagagcatttcattgtgaaaataaaggaggggcagagtaag
agaataaagtgtatggctcataaatgctttgctatttgcgatgaagctgttatcagaaag
ctagttagtagaaggcatcctgatttggcagataaatttgatcggtttctccttgaatca
tacattgaggacaataaaatggtgaaatggtgtccaagtatccctcattgtgggaatgct
atacgggtagagaccgacgaattctgtgaagtagaatgttcatgtggtttacagttctgt
ttcagttgcttatcagaagcacattccccttgttcttgctggatgtgggaactttggacc
aagaaatgtcgagacgaatcagagactgttaactggattacagttcatactaagccttgt
ccaaagtgtcacaaacctgttgagaagaatggaggttgcaacttagttagttgcatttgt
gggcaagcattttgttggctatgtggtggagctactggccgagatcatacttggtcgagt
atcgctggtcacagctgtggtcgttataaagaagatcaggagaaaaagtctgaacgggct
aagcgtgatctctatcgctacatgcattatcacaaccgttataaagctcatacggattct
tttacacaagagtctcgtctgagggagaccataaaagaaaaggtagcaaatttggaatca
agggattcaagattgagagattttagttgggttacaaatggactttacaggcttttcaga
tcaagacgggctctctcgttttcatacccatttgcgttttatatgtttggtgatgactta
tttaaggatgaaatgacaaatgaggaaaaggaaataaaacagcatttatttgaggaccag
cagcaacagcttgaggcaaatgttgaaaagttatcaaaagtttttgaggatccatttgat
gattacgaagagacacgggttatggaaatgaggatgcaagtcttgaatctctctgtggta
actgatacactatgtaagaaaatgtatgaatgcatcgagactgatttattgggagctcta
cagttcagttgtcacaatatagctccataccagtctaagggcattgagagagcaacagag
cttaatggaggctggagcgccaaagcaaacaacaacattacatgtcaaaaagctcatgac
cagacacatggaggttccatagaattggttcagccatcaggttgtgggacttcagatgag
agtggatgctcctcaaggaagcgtacaagaacggattcaagtggtggctttttcgatctt
aacttgcctgctgagctcattgataggaattga
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