Solanum dulcamara (climbing nightshade): 129885663
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Entry
129885663 CDS
T09577
Name
(RefSeq) aspartate--tRNA ligase, chloroplastic/mitochondrial
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
129885663
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sdul01007
]
129885663
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdul03016
]
129885663
03029 Mitochondrial biogenesis [BR:
sdul03029
]
129885663
Enzymes [BR:
sdul01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
129885663
Amino acid related enzymes [BR:
sdul01007
]
Aminoacyl-tRNA synthetase
Class II (A)
129885663
Transfer RNA biogenesis [BR:
sdul03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
129885663
Prokaryotic type
Other AARSs
129885663
Mitochondrial biogenesis [BR:
sdul03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
129885663
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
129885663
NCBI-ProteinID:
XP_055816000
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All DBs
Position
4:4873869..4884477
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AA seq
664 aa
AA seq
DB search
MSILFRALPAIAVRSKPFPFTCLPFFFLNFQKTTSLINRRPLSSTSVSASHTSPLSSPET
LRSSPSPNALQWVSRNQYCGELSQEDVGKRVRLCGWVALHRIHGGLTFVNLRDQTGIVQI
TTLPDDFPDAHSALSDLRLEYVVAIEGVVRPRPAESVNKKMKTGMIEVAAEDVQVLNAVR
LKLPFLVTTADDAKDSSKEEIRLRYRCLDLRRPQMSSNIILRHRVVKLLRRYLEDVHDFV
EIETPILSRSTPEGARDYLVPSRVQPGTFYALPQSPQLFKQMLMVSGFDKYYQIARCFRD
EDLRADRQPEFTQLDMEMAFTSMEDMLKLNEDLIRKVFQEIQGVQLPNPFPRLTYAEAMS
RYGSDRPDTRFDVELRDVSGIFSNTTFKVFSDVLASGGIIKALCVPSGTKTYSNTALKKG
DIYKEAIKSGAKGLPFLKVLNDGSIEGIPPLVSSLDTTKKEELLNQLSAAPDDLILFAVG
HHAEVNKTLDRLRIYVAHELGLIDNSRHSILWVTDFPMFEWNDSEQRLEALHHPFTAPNP
EDINDLSSARALAYDMVYNGVEIGGGSLRIYKRDVQEKVLDIVGISREQAEAKFGYLLEA
LDMGAPPHGGIAYGLDRLVMLLAGSQSIRDVIAFPKTTTAQCALTHSPSEVDPQQLKDLS
LQKM
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcttgtttcgtgctttacccgccatagccgttcgctctaagccgtttcctttt
acttgtctacctttcttcttcttaaatttccaaaaaaccacttcacttatcaaccgccgc
cctctttcttctacttcagtctccgcctctcacactagtcctctttcttcccctgaaaca
cttagaagttctccatctccgaatgcccttcaatgggtaagcaggaatcaatactgcggt
gaattgtcccaagaagatgtgggtaaacgggttcggctttgtgggtgggtcgctcttcat
cggattcatggtggtctcactttcgtcaatctcagagaccaaactggaattgttcagatt
actacacttcctgatgattttcctgatgctcattctgctctgagcgatctgagactcgaa
tatgtggttgccattgaaggtgttgttcggcctaggccagctgagtctgtcaacaaaaag
atgaaaactggcatgatagaggttgctgcagaggatgtccaggtgttgaatgcagtaaga
ttgaagttgcccttcttggtaacaactgcagatgatgcaaaagattcatctaaagaagaa
atcagattacgatatcgatgccttgatttacgccgtccgcagatgagctcaaatataatc
ttgcgacatagagtggtgaaactacttcgaagatacctagaagatgtgcatgattttgtt
gagattgagacaccaatactatctagatcaactcctgaaggtgctcgtgattatttggtt
ccttcaagagttcagccaggaacattttatgcactaccccagagtccgcagctgttcaag
caaatgctgatggtctccggttttgataaatactatcaaatagcaaggtgctttagggat
gaagatttgagagctgacagacaacccgagttcacgcagctagatatggaaatggctttc
acttctatggaggacatgctgaagctcaatgaggatttgattagaaaggtctttcaggaa
attcaaggtgtccaactgccaaacccttttccaaggcttacgtatgctgaagcaatgagt
cgatatggttcagacagaccagatactcgttttgatgttgaattgcgagatgtgtccggc
attttctccaataccacattcaaggttttctcagatgtcttagcaagtggaggaattatt
aaggccttatgtgtgccttctgggacaaaaacttactcaaatactgctttgaagaaaggc
gacatttacaaggaagcaatcaaatctggagcaaagggtttaccttttttaaaggtcttg
aatgacgggagcattgaagggattcccccgctggtttctagtttggatacgacaaagaaa
gaggaattgctgaatcagttgtctgcagcaccagatgatcttatcttgtttgctgttggt
caccatgcagaagtcaataaaacattggatcgtctgagaatatatgtagcacatgaactg
ggtttaattgacaattccaggcattcaatactttgggtgactgactttccaatgtttgag
tggaacgactcagaacagagacttgaggccttgcatcatcctttcactgcacctaatcca
gaagatataaatgacctctcttctgcccgtgccttagcttatgacatggtttacaatggt
gttgagattggcggaggaagcttgagaatttacaagcgtgacgtccaagagaaggttctc
gatattgttggcatttcccgagaacaggctgaagcaaaatttggttatctcttggaggct
ctggacatgggtgctcctccacacggaggaattgcttatgggttggatagattggtgatg
ctcttggcaggatctcagtccatcagggatgttatagcatttccgaagacaacaactgct
caatgtgcccttactcattcaccatcagaggttgatccacaacaacttaaagatctttcg
ttgcagaagatgtag
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