Solanum dulcamara (climbing nightshade): 129885738
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Entry
129885738 CDS
T09577
Name
(RefSeq) bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic-like
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul00740
Riboflavin metabolism
sdul00790
Folate biosynthesis
sdul01100
Metabolic pathways
sdul01110
Biosynthesis of secondary metabolites
sdul01240
Biosynthesis of cofactors
Module
sdul_M00125
Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
129885738
00790 Folate biosynthesis
129885738
Enzymes [BR:
sdul01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
129885738
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
129885738
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Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
Motif
Other DBs
NCBI-GeneID:
129885738
NCBI-ProteinID:
XP_055816116
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Position
4:complement(5718442..5723597)
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AA seq
562 aa
AA seq
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MASINISIPSTSLCRSQALKNFKLFNGLHSGDLYSLNGVSSRSFIQLNARAHLTIKNDLK
VNSAFLSGEGDVRHQSRRESSLFSSLSTGTEAQPDAVTFETLEADVVLTTSGFFSDNDES
DLDCPTKGFSSIPEAIEDIRQGKMVLVTDDEGRENEGDLVMAASKATPEAMAFFVKHGTG
IVCVSMVEEHLERLQLPLMVNDKKNEEKLCTAFTVSVDAKHGTTTGVSAHDRATTVLALA
SRDSKPEDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAMLAGLDPVGVICEVVDDDGSM
ARLPMLRQFAKEHNLKIISVADLIRYRRKTDQLVEHASAARIPTMWGPFTAHCFKSIIDG
IEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGSQLALAMQNIEAAGRGVLVYL
RGHEGRGIGLGHKLRAYNLQDAGRDTVEANEELGLPIDSREYGVGAQMLRDLGVRTMKLM
TNNPAKYSGLKGYGLAISGRVPLLTPITKDNKRYLETKRAKMGHVYGLNLIRPATSTSTT
NGKPNSANTSTVQNSNVSTLGN
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggcttccatcaacatttctatcccttctacatctctgtgtcgctcccaagcattaaag
aacttcaagttgttcaatggactgcactccggagatctatattctcttaatggggtctct
tcacggtcattcatacagcttaatgctagagcacacttaaccatcaagaatgatttaaag
gttaattctgcattcttatctggtgaaggagacgtccgtcatcaatccaggagagaaagt
tctctatttagtagcctctctacaggaactgaggctcaacctgatgctgtaacctttgaa
acgctagaagcagatgttgttctcacaacaagtggctttttctcagataacgatgaatcc
gatttggattgtccgactaaaggtttttcatctattcctgaggctatcgaagacattcgc
caaggaaagatggtgctagtaacagatgatgaaggcagagaaaatgaaggagatttagtt
atggctgcatccaaagctacaccagaagcaatggctttctttgtgaagcatggaacaggg
atagtttgtgtgagcatggtagaggaacacttggagaggttgcagcttccattgatggta
aacgataaaaagaatgaggagaaactttgtacagcattcacagtctcagtggacgcaaaa
catggaacaactacaggagtatctgctcatgatagagcaacgacagtattggcccttgct
tccagagattcaaagcctgaggatttcaatcgaccgggacatatttttccgttgaaatac
agggaaggtggggttttaaaacgagctggacatactgaggcttctgttgatcttgccatg
ttagctggcttagaccctgttggagtaatatgtgaggttgtggatgatgatggttccatg
gctagattgcctatgcttcgtcaatttgcaaaagaacataacttgaagatcatatcagtt
gctgacttaatcagatataggaggaaaacagaccagctggtagagcatgcttctgctgca
agaatacctactatgtggggcccgtttactgcccattgcttcaagtcaataatagatgga
attgagcacattgctatggttaagggagatataggagatggacaagatattcttgtccgg
gtacactcggaatgcctaacaggagatatattcggttcagccagatgtgactgcggatcc
cagctggcactagcaatgcaaaatattgaggctgctggcaggggggttttagtttacctc
cgtggtcatgaggggagaggaattggtttgggtcacaaacttcgtgcttataatttacaa
gatgctggacgtgatactgttgaagcaaatgaagaacttggtttgcccattgattcaaga
gagtatggggttggtgcacagatgttaagggatcttggtgttcgaactatgaagctgatg
acaaacaatcctgcaaaatacagcgggctcaagggttatggtttggcaatttctggtcgg
gtcccccttctgacgcccattacaaaagataacaagagatatctggaaacaaaacgtgct
aaaatgggccatgtatacggcttgaaccttattcgccctgcaaccagcaccagcacaaca
aatggtaaaccaaactctgcgaatacttctactgtacagaattctaatgtttccacactt
gggaactga
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