Solanum dulcamara (climbing nightshade): 129885770
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Entry
129885770 CDS
T09577
Name
(RefSeq) beta-xylosidase/alpha-L-arabinofuranosidase 2-like
KO
K15920
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul00520
Amino sugar and nucleotide sugar metabolism
sdul01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
129885770
Enzymes [BR:
sdul01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
129885770
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GFIT
Motif
Pfam:
Glyco_hydro_3_C
Glyco_hydro_3
Fn3-like
Motif
Other DBs
NCBI-GeneID:
129885770
NCBI-ProteinID:
XP_055816151
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Position
4:complement(6100429..6104898)
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AA seq
781 aa
AA seq
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MKKNRAMALTCENKKHQHSVLLCFFFILAHFCLEFKPVLAQTSAVFACDTETNSSLKSFA
FCDVSLDVSSRVKDLVKRLTLPEKITMLVNTAGSVSRLGIPKYEWWSEALHGISYTGPGV
KFNNIVPHATSFPQPILTSASFNETLFETIGKVVSTEGRAMYNVGQAGLTYWSPNVNIYR
DPRWGRGQETAGEDPTLSSKYGVAYVKGLQQRDDGKKDMLKVASCCKHYTAYDVDNWKGI
QRYNFNAKVTQQDLDDTFNPPFKSCVLDGNVASVMCSYNQVNGKPTCGDYDLLAGVIRGQ
WKLNGYIVTDCDSLNEMYWAQHYTKTPEETAALSLNAGLDLNCGSWLGKYTQGAVSQGLV
NESVIDRAVSNNFATLMRLGFFDGNPKNQIYGNLGPKDVCTQEHQELAREAARQGIVLLK
NTAGSLPLSPKAIKSLAVIGPNANLAYTMVGSYEGSPCKYTTPLDGLGASVSTVYQQGCD
IACATAQVDNAKKVAAAADAVVLVMGSDQTIERESQDRVNITLPGQQALLVTEVASVSKG
PVILVIMSGGGMDVKFAVDNPKVTSILWVGFPGEAGGAALADIIFGYYNPSGRLPMTWYP
QSYADNVDMTNMNMRADPKTGFPGRSYRFYKGPTVFNFGDGLSYSQYKHHLVQAPKFVSI
PLEEGHACRSTRCKFIDAVHEQGCSNLGFDIHLRVQNVGKLSGSHTVLLFTSPPSVHNAP
QKQLLDFQKIHLASQSEGVVKFNLDVCKHLSVVDEVGNRKVALGLHVLHIGDLKHSLTLR
I
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaacagggcaatggccttaacatgtgaaaacaagaaacaccaacactctgtt
ttgctctgtttcttcttcattttggctcatttttgcttagaattcaagccagttttggct
caaacatctgctgtttttgcttgtgacactgaaaccaattctagcctaaaaagttttgca
ttttgtgatgtctcattggatgtgtcatccagggtgaaagatctagtgaaaagattaaca
ttaccagaaaaaatcactatgttggtaaacactgctggtagtgtgagtaggcttggaatc
ccaaaatatgagtggtggtctgaagctttacatgggatttcatacactggtccaggagtt
aaattcaataatatagtccctcatgccactagcttccctcagcccattctcacttctgcg
tctttcaatgaaactctatttgagaccattggaaaggtggtatccactgagggtagagca
atgtacaatgttggtcaagcaggattgacatattggtcaccaaatgtgaatatttaccgc
gatcccagatggggaagaggccaagaaacagcgggtgaagatccaacgctctctagcaag
tatggtgtggcatatgttaaaggtctgcagcagcgcgatgacggcaaaaaagacatgctc
aaggttgcttcttgctgtaagcattatacagcttatgatgtcgataattggaaaggaatc
caacgttacaatttcaatgctaaggtaacacagcaagatttagatgatacatttaaccct
ccattcaagagttgtgttcttgatggaaatgtagccagtgtgatgtgttcgtacaaccaa
gtcaatggaaagcctacttgtggtgattatgaccttcttgcaggggtcatcagaggacaa
tggaaattgaatggatacattgttacggattgtgattcgttaaatgagatgtactgggcg
caacactataccaagacaccagaggagactgcagctttgtctctaaatgcaggtttggac
ttgaattgtggatcttggcttggtaaatacactcagggtgccgtaagccaaggacttgta
aatgaatcagttattgatagagcagtctcaaacaattttgctacactaatgagactcgga
ttctttgatggcaatccgaaaaaccaaatttatggaaatcttggtcccaaagatgtttgt
actcaagaacaccaagagctagctcgtgaagctgcaagacaaggaattgtcttgcttaaa
aacactgctggatcattacctttatcccccaaagccatcaagtcattagcagtcattggc
cccaatgccaaccttgcctataccatggttggaagttatgaaggcagtccatgcaagtat
actactcctttggatggcctaggggcatcagtttcaacagtttatcaacaaggctgtgat
atagcttgtgccactgcacaagttgataatgccaagaaagtagcagctgcagctgatgct
gtagtgttggtaatgggatcagatcaaactattgaaagagagagccaggacagagtaaat
ataactctccctggacaacaagcacttctagtaacagaggttgctagtgtttccaaggga
cctgtgatcctagttatcatgtctggaggtggcatggacgtaaaatttgcagtcgataat
cctaaagtcacaagcattctttgggttggtttccctggtgaagctggtggtgctgccttg
gctgatatcatttttggatattacaatccaagtggaaggctcccaatgacatggtatcca
caatcttatgcagacaatgttgacatgactaacatgaacatgagggcagatccaaaaaca
ggattccctggaagaagttataggttctacaaaggtccaactgtatttaactttggtgat
ggattaagttactcccaatacaaacaccacctagtacaagcaccaaaatttgtgtccatt
cctcttgaggaaggacatgcttgtcgatcgacgaggtgcaagttcattgatgctgttcat
gagcagggctgcagcaacttgggatttgatatccacttgagagttcaaaatgttgggaaa
ttgagtggaagccacacagttttgttgttcacttcaccaccctcagttcacaatgcacct
caaaagcaattattggatttccagaagattcatttggcatcacaaagtgaaggggttgtc
aagttcaacttagatgtttgcaagcatttgagtgtagttgatgaagttggaaacaggaaa
gttgctttaggattacatgtgctacatataggagatttgaaacattccttgactctgagg
atttaa
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