Solanum dulcamara (climbing nightshade): 129885795
Help
Entry
129885795 CDS
T09577
Name
(RefSeq) calmodulin-binding transcription activator 2 isoform X1
KO
K21596
calmodulin-binding transcription activator
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdul03000
]
129885795
Transcription factors [BR:
sdul03000
]
Eukaryotic type
Other transcription factors
Others
129885795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CG-1
Ank_2
IQ
Ank
TIG
Ank_4
Ank_3
Motif
Other DBs
NCBI-GeneID:
129885795
NCBI-ProteinID:
XP_055816189
LinkDB
All DBs
Position
4:6307769..6321284
Genome browser
AA seq
1049 aa
AA seq
DB search
MADCGSDPPGFRLDITQILSEVQHRWLRPAEICEILRNHRKFHLTPEAPYRPVSGSVFLF
DRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSIDVLHCYYAHGEEDDNFQRRSYWML
EQDLMHIVFVHYLEVKGNKVNVGCIRSTKLAHSNYLNDCSLSDSLPTRHKKLASANADST
SLSSTLTEAHEEAESEDSHQACSRFHSYPDRASGMDSHLVENRDTICSSYGSPQSSVEYT
PLPGIDGARKCDLGNFASGSHRTIDLGSQEPVSQHCSNGEMVCHDDFKNNLSVHGNWQYS
FGHSPLQFHGQNVNQDLIADSSYDLGLPSDLLTVRGQSYLYPDEQEEQLTQLNLQYLNSL
VEVQGDINQENCMDMLELGDYSTIKQPHLSSVKMEEGLKKVDSFSRWVAKELEDVEELHM
QPSNQMSWNVIDTEADGSCLPSQLHVESDSLSPSLSRDQVFSIIDFSPNWAYSNLETKVL
ITGRFLKSEGELVEYKWSCMFGEVEVPAEVLADGILRCHAPPHKPGVLPFYVTCSNRLAC
SEVREFEYRFGPYQELGAADVSRTEKHLLERIENLLSLGSVGSCYSSDSMEDSKEKQSTV
NKIICMMEEENQQMIERVSYNDTSQCRVKEDLYFERKLKQNFYAWLVHQVTYDERGRTLL
DDEGQGVLHLVAALGYDWALKAILSSGVSVDFRDMNGWTALHWAAFYGREKTVVGLVSLG
ASPGALTDPSAEFPLGRTPADLASANGHKGISGFLAESSLTTHLSKLTVTDAKEELASEV
CGAKVGETVTERVAVTTTENDVPDVLSLKDSLAAIRNATQAAARIHQIFRVQSFQRKQII
EHCDNELSSDENALSIVASRACKLGQNNGIAHAAAIQIQKKFRGWNKRKEFLLIRQKIVK
IQAHIRGHQVRKKYKPIIWSVGILEKVILRWRRKRSGLRGFRSEAVMNKPSTQEDSLPED
DYDFLKEGRKQTEVRMQKALARVKSMTQYPEGRAQYRRLLSAAEGLREVKQDGPTQIPEI
PDDTVYPEEELFDVESLLDDDTFMSIAFE
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggcggattgtggatcggatcctcccggatttagattagacataacacagatattatca
gaagtgcagcatcgttggctgagacccgctgagatttgtgaaatcctgcggaaccatagg
aagttccatttaaccccagaggctccatacaggccagttagtggctctgtttttcttttc
gataggaaggttctaagatactttaggaaggatgggcataattggaggaagaagaaggat
gggaagacagttaaagaagctcatgagaagctgaaggttggaagtattgatgtgctacac
tgctattatgcccatggagaagaagatgataattttcaaaggcgcagttattggatgctt
gaacaggatctcatgcacatagtttttgtccactatttggaagttaagggtaacaaggtg
aatgtcggttgcatcagaagcactaaattagctcactcaaactatctgaatgactgctca
ttgtccgatagtctccctacgagacacaaaaagctagcttcagctaatgctgattcaaca
agtctatcaagcactttaacagaagcacatgaagaagctgaatcagaagatagtcaccaa
gcgtgttctagatttcattcatatccagaccgagcatctggaatggacagtcatctagtg
gagaatagggataccatctgtagttcatatggttcacctcaatcttcagtggagtataca
ccacttcccggtatagatggagccagaaagtgtgatcttggtaattttgcatctggttct
catagaacaattgatttgggatctcaggaaccagtttctcagcattgttcaaatggtgag
atggtatgccacgatgatttcaagaataatttgtcagtccatggaaattggcagtattct
tttgggcactctccgttgcagtttcatggacaaaatgtcaatcaggatttgattgcagat
tcgagctatgatttgggactaccttcggatctacttactgttagggggcaatcgtactta
tatcctgatgagcaagaagagcaactaacacaattgaatcttcaatatctgaattcactc
gtggaagttcaaggtgacattaatcaagagaattgtatggatatgctagagcttggagac
tattctacaatcaaacagcctcatttgagcagtgtaaaaatggaagaaggcctgaaaaaa
gttgacagcttctcccgatgggttgccaaagagcttgaggatgttgaggagttgcatatg
cagccaagtaatcaaatgtcatggaatgttatagatactgaggctgatggttcctgtctg
ccaagccagttgcatgtggaatcagattcactgagtccctctctctctcgggatcaggtt
ttcagcatcattgatttttcacctaattgggcttattcaaacttggaaacgaaggtattg
attactggaagatttcttaagagtgagggcgagctggttgagtacaagtggtcatgtatg
tttggggaagtagaggttcctgcagaggttttagcagacgggatacttcgttgtcatgct
cccccacacaaaccaggagtactccctttttacgtgacatgttcaaatagattggcttgt
agtgaagtcagagaattcgaatacagatttggaccttatcaggaacttggtgctgccgat
gtttctaggactgagaagcatctccttgaacgaattgaaaatttattgtccttgggatct
gttggtagttgttacagttctgatagtatggaggattctaaggagaaacaaagcacagtt
aataaaatcatctgtatgatggaggaagagaatcagcagatgatagagagagtgtcgtac
aatgatacatcccaatgcagggtgaaagaggatctatattttgaaagaaagctgaaacag
aatttctatgcatggctggttcaccaagttacctatgatgaaagagggcgaactcttctc
gatgatgaaggccaaggtgtacttcatttggtagctgcacttggttatgattgggcctta
aaggcaattttatcatcaggggtaagtgtagattttcgtgacatgaatggatggactgca
cttcattgggccgcattttatggaagggagaagactgttgttggtcttgtctctttaggt
gcatctcctggagcattgacagacccatctgctgaatttcctttgggtagaacccctgct
gatctggcatctgccaatggacacaagggaatatctggatttcttgctgaatcttctttg
accactcacctttctaagcttactgtgactgatgcaaaggaagaacttgcttcagaagtt
tgtggagcaaaagttggagaaacagttacagagcgtgtggctgttacaactactgaaaat
gatgtgccagatgtactgtcacttaaggattccctggctgctatacgcaatgctactcaa
gcagctgctcggatacaccaaattttcagggttcagtcatttcagaggaagcaaattatt
gagcattgtgataatgagttatcatctgatgagaatgctctttctattgtagcttctaga
gcttgtaagttggggcaaaacaatggtatagctcatgcggctgccattcaaatccagaaa
aagtttcgtggctggaataagagaaaagagttccttttaattcgacaaaaaattgttaaa
attcaggctcatataagggggcatcaagtgaggaagaaatataaaccaattatctggtcg
gtaggaattctggagaaggtgatattgcggtggagacgtaaaagaagtggtttgagggga
tttagatcagaggcggtcatgaataagccaagcacacaagaggactcattaccggaggat
gattatgattttctaaaggaaggaagaaagcagactgaagtcagaatgcaaaaagccctt
gctagggtgaagtccatgactcaatatcctgagggtcgtgctcaatatcgtaggctgctt
agtgctgctgaaggacttcgtgaagtgaagcaggatggtccaactcaaattccggagatc
ccagatgataccgtctaccctgaagaggagttgtttgatgttgaaagtctgttggatgat
gatactttcatgtctatagcatttgaataa
DBGET
integrated database retrieval system
