Solanum dulcamara (climbing nightshade): 129885796
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Entry
129885796 CDS
T09577
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 4-like
KO
K11842
ubiquitin carboxyl-terminal hydrolase 12/46 [EC:
3.4.19.12
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sdul01002
]
129885796
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129885796
Enzymes [BR:
sdul01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
129885796
Peptidases and inhibitors [BR:
sdul01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
129885796
Ubiquitin system [BR:
sdul04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
129885796
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
129885796
NCBI-ProteinID:
XP_055816196
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All DBs
Position
4:complement(6321988..6329157)
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AA seq
411 aa
AA seq
DB search
MTHSTQKESKIQSHLHFLLYKLCYDLLNLKTKGRIEEYWYLVDGLMGATGSKLEKALGDQ
FPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYANNKSPPEAEENLLTCLAEL
FSQISSQKKKTGVIAPRRFVQRVRKQNELFRSYMHQDAHEFLNFLLNELVDILEKESHAA
KSLKASSPEKVSNGSCNGHVNGVKKEPLVTWVHKNFQGILTNETRCLRCETVTARDEPFF
DLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLK
RFKYMEQLGRYKKLSYRVVFPLELKLSNTTENTDSEYSLFAVVVHVGSGPNHGHYVSLVK
SHNHWLFFDDENAEIIDESAVQTFFGSAQEYSSNTDHGYILFYESLGASKS
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgacacattcaacccaaaaagaatcgaaaattcaaagtcacctccattttttgctctat
aaattgtgctacgatttgttgaatttgaagaccaaaggcagaatagaggagtattggtat
ttggttgatggtctcatgggtgcaacgggttccaagctcgaaaaggccctcggagaccag
tttcccgaaggtgaacgatacttcggtctcgaaaatttcggcaacacttgttattgcaac
agcgtcttgcaggcgttatacttttgtgtccccttccgcgagcaactgctggagtattat
gcaaataataaaagtcctccagaagcagaggagaatctcttaacttgtttggctgaattg
ttttcacagataagttcacagaagaagaaaacaggtgttattgctccaaggcgctttgta
caaagagtcaggaagcaaaatgaacttttccgaagttacatgcatcaggatgcccatgag
tttttgaacttcttgttaaatgaacttgttgatatcttggagaaagagtcacatgcagca
aaaagtttaaaggcaagttctcctgaaaaagtctcaaatggatcatgtaatggtcatgta
aatggtgttaagaaggagccacttgttacctgggtgcacaaaaattttcagggtatatta
accaatgaaacaagatgtttgaggtgtgagacagtcacagcaagggatgagccatttttt
gatttgagccttgatattgaacagaacagttcaattacaagctgcctaaaaaatttcagt
tctacagagaccctcaatgcagaggacaaatttttctgcgacaagtgctgtagcttgcaa
gaagcacagaaacggatgaagataaagaaaccgccacacatcctggtgattcatttgaag
cgcttcaagtatatggaacaactaggtcgttacaaaaaattgtcttaccgtgttgtgttc
cctctggagctaaaactcagcaacaccactgaaaacacggattctgagtattctctattt
gctgttgtggttcatgtcgggagtgggccaaaccatgggcattatgttagtcttgtgaaa
agccacaaccactggttgttctttgatgatgagaacgcagagatcattgatgaatctgct
gttcagaccttttttggctcagctcaggagtactctagcaatacggatcatggctatatc
ctcttttatgagagccttggagcaagcaagagctga
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