Solanum dulcamara (climbing nightshade): 129885854
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Entry
129885854 CDS
T09577
Name
(RefSeq) uncharacterized protein LOC129885854 isoform X1
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129885854
Enzymes [BR:
sdul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129885854
Ubiquitin system [BR:
sdul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129885854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_4
zf-RING_2
RING_XB3-XBAT31
DUF1232
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
129885854
NCBI-ProteinID:
XP_055816282
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Position
4:complement(7091092..7094870)
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AA seq
370 aa
AA seq
DB search
MKFFLNSLPLPNHNQNPNPIPPSPPMLSDLASDSGDGREEETASSAAVINSEEEEEEMGY
ESPEDEDEVNTTSFSGTEIEDEQEGNREPTAEDEDRRELDGASSKSLVVAETENTFLRTD
KPPTDDCCPICFGNFVVPCRGPCGHWYCGGCILQYWNYGAALQPCNCPMCSSKLTDLAPE
ASLYGQQDADVIEVLKKVRKYNRLFVGGTYGLMLKVLGLPFYMKRVFNEMLNPDRPGAHL
NKLRIFAMFLGLLYTLSPFDFLRIVRAFLCPPFLHAGVLLVKNSRCISLCIDLLFIAISL
QAVKMSLMCLITLPLHYPRCYIWLGCIFDEGVSDMLGKWLRLILLLIDSCQLVKQMFVVK
SLWSLKILDF
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcttcctcaatagtcttcctctaccaaatcataatcaaaaccctaaccctatc
ccaccttctccacctatgctttccgacttagcttccgattccggtgacggacgagaagag
gaaacggcatcttccgccgccgtgataaattcggaggaggaggaggaagaaatgggatat
gagtcgccggaggatgaggacgaggtgaatacgacgtccttttcagggacggagatagag
gatgagcaggaaggtaatcgtgaaccgacagctgaggatgaggaccgtagggagttggat
ggtgcatcttcgaagagccttgtggttgctgagacagagaatacgtttctgaggacggac
aagcctcctactgatgattgttgtcctatttgctttggcaattttgtcgttccttgccga
ggtccctgtggccactggtactgcggaggttgcattttgcaatactggaactatggggcc
gcacttcagccttgtaactgccccatgtgttcgagtaagcttactgatttggcacctgag
gcatcattgtatggtcagcaggacgctgacgtgattgaggtcttgaaaaaagttcgaaag
tataatcgcctttttgtaggtggcacttatggcctcatgctgaaggttcttggactgccc
ttttacatgaagagagtgtttaatgaaatgttgaatcctgacaggcctggtgctcatttg
aacaaattgcgaatttttgctatgttcctgggactcctttacacactcagcccctttgat
tttctcagaatagtgagagcttttctttgtccacccttcttgcacgctggagtgctattg
gtgaagaactcaaggtgcatttctctttgcattgaccttttgtttattgccatttcactg
caggccgtcaaaatgtcattgatgtgtttgattactctgccattgcactatcctcggtgt
tatatttggttgggctgtatcttcgacgaaggcgtttccgacatgttagggaaatggctg
aggctgattttgctgctcattgacagctgccagctggtgaagcagatgtttgtcgtcaag
tcattgtggagcttgaagattttggatttctaa
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