Solanum dulcamara (climbing nightshade): 129885951
Help
Entry
129885951 CDS
T09577
Name
(RefSeq) CLP protease regulatory subunit CLPX2, mitochondrial isoform X1
KO
K03544
ATP-dependent Clp protease ATP-binding subunit ClpX
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
sdul03110
]
129885951
Chaperones and folding catalysts [BR:
sdul03110
]
Heat shock proteins
HSP100
129885951
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_2
AAA
ClpB_D2-small
AAA_5
Mg_chelatase
AAA_22
RuvB_N
MCM
Sigma54_activat
Sigma54_activ_2
AAA_14
AAA_16
AAA_7
ABC_tran
IstB_IS21
T2SSE
AAA_18
TsaE
AAA_28
nSTAND3
RNA_helicase
DEAD
NACHT
ResIII
AAA_3
AAA_29
AAA_24
Microtub_bd
AAA_30
AAA_33
Motif
Other DBs
NCBI-GeneID:
129885951
NCBI-ProteinID:
XP_055816421
LinkDB
All DBs
Position
4:complement(8084211..8097031)
Genome browser
AA seq
638 aa
AA seq
DB search
MSAIFKYKSKLHTFTFRTSLFSISSSKFHSPSLKPRRKPSLFFNPFEGSRVGLVFKFEGS
RLGLGFRHKWEGSSDNYDHIKSEVNCPRCSKMMTVLFSNRPLSITAGETGIYQAVNLCPY
CRTAFYFRPFKLEPLQGTFIEIGRVKGGEKESDDEMAGSSGKNDGKIWEKLRSYSGTNGS
DDGGQGSCETETKDSTEARKEEGCGRGGWEGANLGIELLTPKEICKGLDQFVVGQERAKK
VLSVAVYNHYKRIYHSSLNKKSDSGKVRDELENIDNDSVELEKSNVLLMGPTGSGKTLLA
KTLARLINVPFVIADATTLTQAGYVGEDVESVLYKLLEAADFNVEAAQQGIVYIDEVDKI
TKKTESLNVGRDVSGEGVQQALLKMLEGTIVSVPDNRARKHPRGDTIQIDTKDILFICGG
AFVGLEKTISERRQDSSIGFGAPVRTNMRVGGVTDAVVTSSLLESVESDDLTAYGLIPEF
VGRFPVLVSLSSLDEDQLVQVLTEPKNALCKQYKQMFNLNNVKLQFTENALRLIAEKAIA
KNTGARGLRSILESILTEAMFEVPGSKPGEESVEVVLVDEEAVGTADTVGCGAKVLRGSS
GLENIPPSTGSTMTMEKKEATKEDLDSESEAPARALSL
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccatattcaaatacaaatcaaagctccacacttttaccttcagaacatctctt
ttttccatatcgtcttccaaatttcattccccttctctcaaacctagaagaaaaccctcg
ctcttcttcaacccatttgaaggttctagagtagggctagtgtttaaattcgaaggttct
agactagggttagggtttaggcataaatgggagggaagctccgacaactacgatcacata
aaatcagaggtgaactgtccacgctgttcgaagatgatgacagtgctattctctaaccgg
ccgttgtcaatcaccgccggagagactggaatttaccaggcggtgaatttgtgtccttat
tgccggacagcgttttactttagaccgtttaagctggagcctttgcaagggactttcatc
gagattggcagggttaagggaggtgaaaaagagagtgacgatgaaatggctgggagttct
gggaagaatgatggcaagatttgggaaaagttgaggtcttatagtgggaccaatggtagt
gatgatggtggacagggtagttgtgaaactgaaacgaaggattcgacggaggcaagaaag
gaagaggggtgtggtagaggagggtgggaaggtgctaatttggggatagagttgcttaca
ccaaaggagatatgtaaagggcttgatcagtttgttgttggacaagagagagccaagaag
gtgctttctgttgcagtttacaaccattataaacgaatataccattcctctttgaataaa
aagtcagattccggtaaagttagagatgagctggaaaatattgataatgattcggtcgaa
ttagagaagagcaatgttttactgatgggccccactggctcagggaaaacattacttgcg
aagacgctagctcgtctcatcaatgttccttttgtaattgcggatgcaacaactttaaca
caggctggttatgtcggcgaggatgtggaatctgtattatacaaattacttgaggctgct
gacttcaatgtcgaagcagctcagcaagggattgtctacatagatgaagttgataaaata
accaaaaagactgagagcctgaatgttgggagagatgtatctggtgagggcgtccaacag
gcgctgctgaagatgcttgaaggaactattgttagtgttcctgacaatagagcacggaag
catccacgtggcgatactattcagatagacaccaaagatatcctttttatctgtggtgga
gcttttgttggtttagagaagacaatttcagaaaggcgacaagattcctcaattggattt
ggagcacctgttcgaactaacatgagagtgggtggtgtaactgatgctgtagtcacatca
tcactattggaatctgtagagagtgatgatctcactgcatatggactcatacctgaattt
gtggggcggtttccagttttagtgagtttatcttcactggatgaggatcagcttgttcag
gttctcacagaacctaaaaatgctctttgcaagcaatacaagcaaatgttcaacttgaat
aatgtcaaattacagtttactgagaatgcacttcgacttattgctgagaaagccattgcc
aaaaacactggtgcacgaggcttaagatctatactagaaagtattctgactgaagccatg
tttgaggttcctggaagtaagccaggtgaggaatctgtagaggttgtcctggttgatgaa
gaggctgtcggaacagctgatacagttggatgtggagcaaaagttcttcgtggtagcagt
gggctggagaatattcccccttctactggatcaacaatgacaatggaaaagaaggaagca
acaaaagaagacttggattcagagtctgaggctccggcaagagccttgagcttgtga
DBGET
integrated database retrieval system
