Solanum dulcamara (climbing nightshade): 129885958
Help
Entry
129885958 CDS
T09577
Name
(RefSeq) uncharacterized protein LOC129885958
Organism
sdul
Solanum dulcamara (climbing nightshade)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIR
NB-ARC
WHD_ROQ1
TIR_2
LRR_14
LRR_8
LRR_13
AAA_22
nSTAND3
AAA_16
NACHT
C-JID
LRR_3
AAA
NPHP3_N
AAA_14
LRR_4
AAA_18
LRR_R13L1-DRL21
AAA_24
ABC_tran
ATPase_2
Sigma54_activat
AAA_33
Septin
Mg_chelatase
AAA_7
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
129885958
NCBI-ProteinID:
XP_055816431
LinkDB
All DBs
Position
4:8220783..8232310
Genome browser
AA seq
2283 aa
AA seq
DB search
MMRAEKASVSRTRCSYHVYLSYRGHDISMNFINLLHTALTDVGIQTFKKHSEARKGKIVG
SELQKAVKESRISIIVFSEDYGYSRRCLDELVNILERKQSTGHMILPVFYRVDPSHVRKQ
RGSYEKAFHNYEEQIMVEAVERRNERISKIKIWRASLKEVANMAGIVLEDGDELKFIQEI
VEDIWGKLFRKVLSFAPYPVGIYSRVKEITFWLQDSSTNSHTLMIFGEPGIGKTTIAKAL
FNLHCDRFQCSSFLGDIREIAKESCGLINLQKNLLSDLLKEDKIDLNDIDRGASTIKECL
VHKKFLLVLDDVDDLNQLKAILDSRDWIPPGSKVIITTTNERLLKPHDACVMYESKRLDN
HEALKLFSLHTFGQDHPVKEYMKQSKQIVKHCRGVPLALQVLASSLRGGSSIDMWEGAIK
KLERYSECHNHKVLELSYEALPDDHDKNVFLDIACFFVRKDKDYTIKVLDECGFHATAEI
QNLIDRYLLTVTPDNKLMMHQLLQEMGKEVICGESPIEPGKRSRIWHHKDALSILQEETV
TESIEGLVLKMCGSDESKPYRHESISKRPYSDDIQSTSTLTLKKKSSKRLSLDFFSSCQG
NYVSARSQTVQNEAGMSAKAFSKMQELRYLEMENVQLSGTFEGFPKKLRWMCWYGFQLTS
FPSGFPHENLVVLEMRNSNLQQTWEGAKSLRSLKILDLGRSHSLIKTPDFSGLPNLERVI
LEDCISLVKVHESIGRLHKLLVLNLKGCENLRKLPRKIGQIKSLEELTLCGCSKLEFSTL
MRNTKYLQSFPRNVTKRDQFSSKAEKPICSDSLSAKSVYSIFWSLWPKSAGSMSQLFQIT
LQSLDISHCNLTDTVIPYDLSVLSSLKYLSLRGNFISTLPESLKSLTMLQSFQLADCTRL
QLIPELPLSLQILNACNCRSLNRVTNLPNFMRTLDLHLQNCEKLVEVQGVFKLDPIEDIH
DILDLSCLDNLEVIEVDVELCNYLTSTKSKGPVQGLYEFGIHNIYIPGGKVPPKFNNIST
GSSIAFTVPQLPNAKIQGLKICVAYAEYYDECFSERHFIKVSNKTKGIKWIYGPTIFGIA
SPGNPMLWFSHWKFGNQLERGDQVVVSLSVGCLVKEFGVHLVGSEQSEEDNLSKNAEGCR
RASYPLQHAIGGDLSPYELSSALVGAGWRTFKDDNEIERGENIKTELENAIINSRSSIII
LSKNYATSTWCLDELVKILEHKRTKGHAILPVFYHVDPSEVRDQKKSFAEAFTRYERQIE
AESHEGKRDWMDKVQKWRAALGEVADLGGVLVNNQEDRKESVFIDEILQFIEDILNRTIS
SVAPYLVGISSRVKNIISWLQDGSHDDNVIAICGMSGIGKTTVAKYVFTTNFRRFEGSSF
LANIQDISQQPDGLIRLQKQLLYDLTGKKSKIQDTDEGIIKIRDAICFKRVLVILDDIDQ
QEQIHAIIGMKNWFCPGSKIIITTKNSCLLKVHEIQKFHKVREMGNAESLELFSWHSFGE
DHPADDYMELSKKVVKHCGGLPLALQVLGSSLRGKNIDVWKSALDKLEAIPASQIIKKLK
FGYDSLKDDHDKNLFLDIACFFTRKDKDYVIAVLDESYIYTRVGIQNLTDRFLLMIEGNK
LIMHQMLRDMGREIVRQESSKKPGRRTRLWHYKDSFNVLRENMGSETIEGLFFDMNMVKE
DQSFMGNSSSGRKCLFSEFKSHRFGFSRHPNKFSSKTFNELELGTNLFTVMNKLRLLQIN
YTHLSGAYKDFPKNLRWLYWRGFPLKCVPNDFPLESLSVLDMRNSCLERLWEGRRVLPLV
KILNLSHSHSLFRTPDFSGLPMLEKLILKECVNLIEVHESIGTLEARLIFLNIKNCKRLQ
KLPREICKLKVLKTFIISGCSNLVELPRDLWRMQSLEVFLANEIPMSQLPSKRKQNPIWH
ALIRSWVLKPRKVLELPWVCLPKSLVNLSLSQCNLSEVAFPRDFSNLMSLQNLNLSKNPI
SCLPDCIRTLSRLNNLELGSCTMLKFLIDLPRVHNLGVGYCTSLEKVTYLSVGCRAKVYH
LNGCKELTDMEGSFKLEAMGGIEKTMKSLELSMWDSVGSFEVKLYNMSTHTESRGPVKVL
FESGLISIYLPGSKVPNWFCYKSAGATLSFTVPSPPDLKIQGITVCSVYTIDWKVWVQGI
QFYLIIHNEQKNVKLVYSPTCYGLPEGQNEMLWFSHWKFQSQLDAGDTLNVTVITMDGFS
IKEFGIHLMHGEQVDMVLNSNSQEMQRDYPYQGMIPTKRQGLVDFFCYGHMGIGLDYILP
YIP
NT seq
6852 nt
NT seq
+upstream
nt +downstream
nt
atgatgagagctgaaaaggcatcagtctctaggactagatgctcttatcatgtctacttg
agttatagaggacacgatatcagcatgaactttatcaatctcctacacactgcattgact
gatgtaggtattcaaacattcaagaaacacagtgaagctagaaaaggaaagattgttgga
tcagaattgcaaaaggcagtcaaggaatcaaggatttcaataattgtattctcagaagat
tacggatattctagaaggtgtctagatgaacttgtgaacatccttgaacggaagcaaagc
actggtcatatgattctacctgtgttctatcgtgtagatccatcccatgttagaaagcag
agagggtcttatgagaaagcatttcataattacgaagagcagatcatggtggaggcggtt
gaaagaaggaatgagcgcatatcaaagataaagatatggagagcatctctcaaggaggtt
gcaaatatggcagggatagttctagaagatggggatgagctgaagtttattcaagaaatt
gttgaggacatttggggtaagctgtttcgcaaagttttgagttttgccccatatccagtt
ggaatatattcccgtgtaaaagagattactttctggttacaagatagctcgactaattct
cacacattgatgatttttggagaacctggaatagggaaaacaaccattgccaaagctctt
tttaacctacattgtgacagatttcaatgcagcagttttcttggagatattcgagaaatt
gcaaaagaaagctgtggtttgattaacctgcagaaaaaccttctttcagatcttttgaaa
gaggataagattgatctaaatgatattgatagaggagcttccacgatcaaagaatgttta
gtccataaaaagtttcttcttgttcttgatgatgttgatgatttgaatcaactgaaagca
atacttgattcaagagattggattcctccagggagtaaagttattataacaactacaaat
gaacgcttgctaaagcctcatgatgcttgtgtgatgtatgaaagcaagaggctggacaat
cacgaggcacttaagctcttcagcttgcatacttttggacaagaccatcccgtgaaggag
tacatgaagcaatccaagcagatagttaaacattgtcgtggggttcctttagctcttcag
gttctagcctcttcgttacgtggtggaagtagtatagatatgtgggaaggtgcaataaag
aaattagaaagatattctgaatgccataaccataaagttcttgaactaagctatgaagct
ttgccagatgatcatgataaaaatgtatttcttgatattgcttgcttctttgtcaggaag
gacaaagattatacaatcaaagttctggatgaatgtggtttccatgctactgctgaaata
cagaatctcattgatagatatctcctgacagtgactcctgataacaagctaatgatgcat
cagttactacaggaaatgggtaaagaggtcatctgtggagaatcacccatagaacccggt
aaacgcagcagaatctggcaccacaaggatgccctcagtatactgcaggaagaaactgtt
acagaatctattgaagggcttgttcttaagatgtgtggttcagatgaaagcaaaccatac
agacatgaaagtatatcaaaaaggccttactctgacgatatacagagtacttcaacgttg
actctcaagaaaaaatcatcaaagaggctttccctagactttttctcttcgtgtcaaggg
aattatgtttcagcaagatcacagactgtacaaaatgaagctggaatgagtgctaaagca
ttttctaaaatgcaagaattgagatatcttgagatggagaatgtgcagctttctggcacc
tttgaaggatttccaaagaagttaagatggatgtgctggtatggattccaattaacatcc
tttccaagtggcttccctcatgaaaatcttgtagttcttgaaatgaggaatagcaacttg
cagcaaacctgggagggagcaaagtctctacgatcattgaagatacttgatcttggtcgc
tcacatagtctcataaagacccctgacttctctggactgccgaatctagaaagagtgatt
cttgaagactgcataagtttggttaaggtccatgagtccattggaagactccataaactt
cttgtcttaaatctgaagggatgcgagaaccttaggaagcttccaaggaaaattgggcaa
atcaaatccttagaagaactaacactttgtgggtgctcgaagctggagttttccacatta
atgagaaatactaaatatttgcaatcatttccacggaatgtgactaaaagagatcaattt
tcctctaaggctgaaaagccaatatgcagcgactctctgtctgctaaatcagtctattca
atcttctggtcactgtggccaaaatcagcaggttcaatgtcacaactctttcagatcacg
ttacaaagtttggatatttcacattgcaatctgactgacaccgttattccctacgatctt
tctgtactatcctccttgaaatatctgagtctaagaggaaatttcatttccaccctgcca
gagagcctgaagagcctaactatgctgcagtcctttcagttagctgactgcacaaggctc
cagttgatccctgagcttccgttgagcttacaaatattgaatgcatgtaactgcagatca
ctgaacagagtaacaaatttacccaacttcatgaggacacttgacttgcacttgcagaat
tgtgaaaaactggtcgaggttcagggagtattcaagctagatcctattgaagacattcat
gatatcctcgatctgtcttgcctagataatttggaggttatagaagtagatgtggaactt
tgcaactatctgacctcaacgaaaagcaaaggtcccgttcagggactatacgaatttggt
atacacaacatttacattcctggaggcaaggttcctcccaagttcaataatataagcaca
gggagctcaatagctttcactgtgcctcaacttcctaatgctaagatccaaggattaaag
atatgtgttgcttatgcagaatactatgatgaatgtttcagtgaaaggcacttcataaaa
gtgagcaataagaccaagggaatcaaatggatttatggtccaacaatttttggaattgca
agtcctggtaatccaatgctatggtttagtcattggaagtttggaaatcagctagaaaga
ggagatcaagttgttgtttcattaagcgtgggttgcttagttaaggaatttggtgtccat
cttgtgggcagcgaacaaagtgaggaagacaacctatctaagaatgcagagggatgtcgt
cgagcttcctatccactacagcatgcaattggtggagatttgtctccttatgagctaagt
tcagctttggtaggtgcagggtggcgtacgtttaaggatgacaatgagattgagagaggg
gaaaatattaagacggaattggagaatgcaattataaattcgaggagttcaataattatc
ctctcgaagaactatgctacttcgacgtggtgccttgatgaacttgtcaaaatccttgaa
cataagaggacaaaagggcatgcaattcttcctgtcttctatcatgtcgatccttctgaa
gttagagatcagaaaaagagttttgcagaagcatttacgagatatgagaggcaaattgaa
gctgaaagtcatgaaggaaagagggattggatggataaggtccaaaaatggagagcagct
cttggagaggtggcagatttgggtggtgttctagtgaacaatcaagaggataggaaggaa
tcagtgttcattgacgaaattcttcaattcattgaggatatattgaaccggacaatatca
agtgttgcaccttacctggttgggatcagttcacgggtcaaaaatatcatttcatggttg
caagacggatcacatgatgataatgttattgcaatttgcgggatgagcggaattgggaag
acaactgttgccaaatatgttttcactacaaactttagaagatttgaaggtagtagcttt
cttgcaaatatccaagatatttctcagcaacctgatggtttaattcgcttacagaagcag
ctcctttatgatttaactgggaaaaagagtaaaatacaagatactgatgaagggatcatc
aagatacgagatgctatatgttttaaaagagttctagtcatattggatgacattgatcaa
caagaacaaattcatgctataattggaatgaaaaattggttctgtccaggaagtaaaata
atcataacaactaagaattcatgtttgctgaaggttcatgaaattcaaaaattccataaa
gtcagggaaatgggtaatgctgaatcactggagcttttcagttggcattcctttggggag
gaccacccagctgacgactacatggaactatccaaaaaggtggtaaagcattgtggaggg
cttcctctggcacttcaagtcttgggttcttctcttcgtgggaaaaatatcgatgtatgg
aagagtgcactagacaagttggaagcgattcctgcgagccagataattaaaaaattaaaa
tttgggtatgactcattaaaagatgatcatgataagaacttgttccttgacattgcctgc
ttctttacaagaaaggacaaagattatgttattgcagtgctagacgaatcttatatttat
acaagagttggaattcagaatctcacagatagattcctgttgatgattgagggtaacaag
ttgataatgcatcaaatgcttcgggacatgggcagagaaatagtccgtcaagaatcatct
aagaagcctgggaggcgcacccggttgtggcactacaaggattcatttaatgtattgaga
gaaaacatgggctcagagacaattgaaggtcttttctttgacatgaatatggtaaaggaa
gaccagtccttcatgggaaattctagcagtggaagaaagtgtctgttttcagaatttaag
agtcatcggttcggtttctccaggcatcccaacaaattttcttcaaaaacctttaatgag
cttgaattgggaacgaatctctttacagttatgaacaagctaagactgcttcagataaat
tatacacacctaagtggtgcttataaagattttcccaagaacctgaggtggctatactgg
agaggttttcctttgaagtgtgtgccaaatgattttccattggagagcttgtctgttctt
gacatgcggaacagctgtctggaaagactgtgggaaggaagaagagtgcttccactggta
aaaattctcaacctcagccactctcattctcttttcagaactcctgatttttcaggactc
ccaatgctggagaagcttattctcaaagagtgtgtcaatctcattgaggttcatgaatcc
attggaaccttagaggctcggctcattttcttaaatatcaaaaactgcaaaagacttcag
aagctacctagagagatttgcaagctaaaagttcttaaaaccttcataatatctggctgc
tcaaatcttgtagagttgccaagagatctgtggaggatgcaatccttggaagtgtttctt
gccaatgaaatcccaatgagtcaattaccctctaagagaaaacagaacccaatatggcat
gcacttatccggtcttgggttctgaagccaagaaaagttctagagcttccgtgggtttgt
ttaccaaaatctttggttaatttaagtctatctcagtgcaacctatctgaagttgctttt
ccaagggacttcagtaatttaatgtcattgcagaacctaaacctcagtaaaaatccaatc
agttgtcttccagattgcatcagaactctttccaggctcaacaatcttgaattaggttct
tgtacaatgcttaaatttctcatagacctacctcgtgtccacaatttgggggtgggatat
tgcacttccctagaaaaagtaacgtatctatcagtagggtgccgtgcaaaagtttaccat
ttaaatggctgtaaagaactcactgatatggagggaagcttcaagttggaagccatggga
ggaattgagaaaacaatgaagtcattggaattaagcatgtgggattctgtcggaagcttt
gaagtgaaattgtacaacatgtcaactcatacagaaagtagaggaccagtaaaggtgttg
tttgaaagcggattgatcagcatatatcttccggggagcaaggttcctaattggttttgt
tacaagagtgctggagcaactttatctttcactgtcccttcacctcctgatctcaagatc
cagggcataactgtgtgctcagtgtacacaattgactggaaagtctgggttcagggtatc
caattttatttgataatccataatgagcagaaaaatgtgaaactggtttatagcccaact
tgctatggtcttcctgaaggccaaaatgaaatgttatggttcagccattggaaatttcag
agtcagctggatgctggtgacaccttgaatgtcacagttattactatggatggttttagc
atcaaggaatttggtattcacttaatgcacggtgagcaagtagacatggttttgaactca
aacagtcaagaaatgcagcgagattatccttatcaggggatgatacctaccaaacgtcaa
gggcttgtagattttttctgctatggccatatggggattggattggactacattttgccc
tacataccatga
DBGET
integrated database retrieval system
