Solanum dulcamara (climbing nightshade): 129886079
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Entry
129886079 CDS
T09577
Name
(RefSeq) tip elongation aberrant protein 1-like isoform X1
KO
K20285
Rab9 effector protein with kelch motifs
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdul04131
]
129886079
Membrane trafficking [BR:
sdul04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
129886079
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Kelch_3
Kelch_4
Beta-prop_ATRN-LZTR1
Kelch_1
Kelch_5
Kelch_6
Kelch_2
NANM
DUF6242
Motif
Other DBs
NCBI-GeneID:
129886079
NCBI-ProteinID:
XP_055816582
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All DBs
Position
4:9684297..9687945
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AA seq
657 aa
AA seq
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MGSLGDEVTVSVSIQKKKAMWLFPKVMGIHPSERWGHSSCNSNGFVYVFGGCRGGLHFSD
VLVLNLEAMTWSILVTTGQGPGPRDSHSAVLVGHRMVVFGGTNGSRKVNDIHVLDVRSQE
WTQLECQGNPPSPRESHTATLVGGDKLVIFGGSGEGEANYLNDLHVLDLKTMRWSSPEVR
GEMPVPRDSHSAVAIGNRLYIYGGDCGDRYQGDVDVLDMDTLMWSKLDVLGPSPGARAGH
ASVSFGSKVYVIGGVGDKKYYNDVWVLDVKNSSWTQLDVMGQKPQGRFSHTAAARNTDIV
IYGGCGEDERPLDELLILQFGVEYPNGTSSLCGGRASGNTSHYDKKRFLRERDNSSQEAI
CRGKKEDTQAMGSQELEFVSKAAFRFSSDTLHPKRRRMSHNSHIFNLESDQEEDQSPSLS
QRCSPPSQSDVEMSTIKPVSGSGTASDRFPFARQQHLIPNNCQPSPRNVITRNPHDLQLF
REQPNPSNSSGHVSPILMDKQEVQCQSLEPERFHNLIGAEIRGKVDGAFDSGYLMTAVVN
GKIFRGVLFAPAPDLVPRGPVLGQNPSPPPGHVVVNYANTHVNQLSLGCRRQPQQLVKMQ
VPELGRQNIGKVPIRRSTSSVMRSSHQLEKEKDTQKRSELEGVVLTLGGPGCGNAKT
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgggatctttaggtgatgaagtaacagtatcagtatcaatacagaagaagaaggcaatg
tggttatttccaaaggtgatgggtattcatccttctgagagatggggtcattcttcttgt
aactctaatggatttgtctatgtttttgggggatgtcgcgggggcttacattttagtgat
gtacttgtactaaatcttgaggcaatgacttggagcattcttgtgacaacagggcaagga
ccggggccaagagatagccacagtgctgttcttgttggccacaggatggtagtatttggg
ggtacaaatggctcaaggaaggtcaatgatattcatgtattggatgtcaggagccaagaa
tggactcaacttgaatgtcaaggcaatccaccttcaccgcgggaaagtcacacagctact
ctcgtaggtggtgataaattagtgatctttggtggtagcggtgaaggcgaggcaaactat
ttgaatgatttacatgttttggacctcaaaactatgaggtggtcatctcctgaagtgagg
ggtgaaatgcctgttcccagggatagccacagtgctgtcgcaattggtaataggctttat
atatatggaggagattgtggtgaccgatatcaaggtgatgttgatgttcttgatatggat
acactaatgtggtcaaagctggatgttcttggaccgtcgcctggtgctcgagccggtcat
gcctctgtgagttttgggtcaaaggtatatgtgattggtggagttggagacaagaaatac
tacaatgatgtttgggttcttgatgtgaaaaattcttcatggactcagcttgatgtaatg
ggccaaaaaccacaggggcgattttctcatactgctgctgcacggaacacggatattgta
atctatggaggttgtggcgaggatgagcggccgctcgatgagttacttatcttacagttt
ggagtagaatatcctaatgggactagcagtttgtgtggtggcagagcttctggaaataca
agccattatgataagaaaagatttctgagagagagagacaatagctcgcaggaagccata
tgtaggggaaagaaggaagatacacaagcaatgggatcacaagaacttgagttcgtatca
aaagcagcttttcgatttagttctgacacattgcatcccaagaggagaagaatgagtcac
aattcacacatatttaatctggagtcagatcaagaagaagatcagtctccttctctatct
caacgttgttctcctccgtcccaatccgatgtagaaatgagtactattaagccagtctct
ggttctggaactgcatcagatcggtttcctttcgcaaggcagcaacatttgatccctaac
aattgccaaccaagcccgaggaatgtcataacaaggaatcctcatgatttgcaattattt
cgagaacaacctaatccatcaaactcatcaggacatgtatctcccattcttatggataag
caggaagtgcaatgccaatccttggagcctgaacgattccacaacttgattggagctgag
atccggggaaaagtcgatggagcatttgactctggttatctaatgactgctgttgttaat
ggaaagatttttcgaggtgttctgtttgctccggcacctgatctagtaccacgaggaccc
gtccttggtcagaatccttcaccccctccgggacatgttgttgtcaactatgcaaacaca
cacgtgaatcagttaagtcttggttgtcgtaggcaacctcagcagttggtgaaaatgcaa
gttccagaactcggacgacagaacatagggaaagtaccaattagaagatcaacatcatca
gtcatgagatcatcacatcaactagagaaagagaaggatacacagaaaagaagtgaactt
gaaggagtggttctcacactaggaggtccaggatgtggcaatgcaaaaacttag
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