Solanum dulcamara (climbing nightshade): 129886267
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Entry
129886267 CDS
T09577
Name
(RefSeq) protein HASTY 1
KO
K14289
exportin-5
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129886267
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdul03016
]
129886267
03036 Chromosome and associated proteins [BR:
sdul03036
]
129886267
Transfer RNA biogenesis [BR:
sdul03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
129886267
Chromosome and associated proteins [BR:
sdul03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
129886267
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
Motif
Other DBs
NCBI-GeneID:
129886267
NCBI-ProteinID:
XP_055816847
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All DBs
Position
4:complement(11987039..12003126)
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AA seq
1199 aa
AA seq
DB search
MEEHGAASNVARAIVAALDWNSSPDERKAAYAYLESIKAGDVRVLVSTSFLLVRKEWSSE
IRLQAYKMLQHLVRLRWDELNPDERRNFASVAVDLMSEITNSSEEWALKSQTSALVAEIA
RREGLSLWQELFPSLVALSNKGPAQAELVSMMLRWLPEDITVHNEDLEGDRRRLLLRGLT
DSLPEIFPLLYSLLERHFGAALTEAGRQQLEVARQHAAAVTATLNAVNAYAEWAPLPDLA
KYGIIYGCGFLLSSPDFRLHACEFFKLVSLRKRSTDAAVEFDSAMSNIFQILMKVSGDFL
QKSDSGAVIDENEFEFAEYICESMVALGSSNLQCIAGDNSVLSFYLQQMLGFFKHHKLAL
HYQSLLFWLTLMRDLLSKPKIVVSGEKSATNLAVGSGQDTEKNKILAFVNDDICSSILDV
SFQRLLKKEKLNPGTSLSVGTLELWSDDFEGKGDFGQYRSRLLELIRFVAAVKPMVAAAK
VCERSMTIIKSLFLAPYPAQELVILESMQLALENVVNAVFDGSSETVRSSSEVQQSLCRM
FEGLLQQLLPLKWTEPALVEVLGHYLDALGPFLKYNPDVVGSVVNKLFELLTSQPFVVKD
PATSASRHARLQICTSFIRIAKAADQSILPHMKGIADTMALLQKDGRLLRGEHNLLGEAF
LIMASAAGVQQQLEVLAWLLEPLSKQWTQLDWQDTYLSDPTGLIRLCADTPFMWSIFHTV
TFFEKALKRSGLRKGNISVQAIPTSDSLHPMASHVSWMLPPLLKLLRAIHSLWSPAVSQA
LPGEIKAAMAMSDVERASLFGGGNVKLPKGTLSFTDGSPFDMNREAYAEPNEADIRNWLK
GIRDSGYNVLGLSATIGDPLFKCLDSQSVIIALMENIQHMEFRHLRLLVHLVLIPLIKNC
PSDMWESWLEKLLHPLLVHSQQALSYSWSSLLQEGRAKVPDLHGLVDGSDLKVEVMEEKL
LRDLTRETCSILSVFASPILNAGLPSLESSGHVSRVDESSLKDLAAFATSSMVGFVLMHK
SVALPALQISLEALRWTDGEAVTKVSSFCGAVILLAISTTNMELRDFVCKDLFPATIQAL
ALESNAFISADLVALCREIFIYLADKHPAPRQILLSLPCITSQDLLAFEEALTKTASPKE
QKQHMKSFLMLATGNKLKALAAQKSVNVITNVSTKPRNVTPALESNIDEGDAIGLAGIV
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atggaggaacatggggcagcaagcaatgtagctcgtgcaatagtggctgcccttgattgg
aactcttctcctgatgaacgtaaagccgcttatgcctatttagaatctataaaagcaggg
gatgtacgtgtcctggtgagcacatcatttcttttagtaaggaaagaatggtcttcagaa
atacgactgcaagcctacaagatgcttcagcatttggtgcggttgcgatgggatgaatta
aaccctgatgagcgaaggaactttgcaagtgtagctgttgatttgatgtctgaaattact
aattccagtgaagaatgggctttgaaaagtcagacatcagctcttgttgctgagatagct
aggagagaaggtttaagtttgtggcaggagctttttccatctctagtagctctttctaat
aagggtcctgcacaagcagaactggtctcaatgatgctaaggtggcttcctgaagatata
actgtccataatgaagatttggaaggtgatcgccgtaggctattgttacgtggacttacc
gactctttgcctgagatttttcccttactgtacagtttactagaaaggcactttggagct
gcactaactgaagcaggaagacaacaattagaagttgcaagacagcatgcagcagctgta
actgccactctaaatgctgttaatgcatacgctgaatgggctcccttgccagatcttgca
aaatatggaataatatatggttgtggcttcttgctctcctctccggactttcgtcttcat
gcatgtgagttcttcaagcttgtctccctgaggaaaagatcaactgatgctgctgttgag
tttgattctgcaatgagtaacatttttcagattttgatgaaagtctctggagacttcttg
caaaaatctgactctggtgcagtcattgatgagaatgaatttgagtttgctgagtacata
tgtgagagcatggttgctttgggttcttcaaacttgcaatgtattgctggtgataattca
gttctatcattttaccttcaacagatgctcggattcttcaagcaccataagcttgctctt
cattatcaatctctactgttttggctgacgcttatgagagatttattgtcaaagccaaag
attgttgtgtctggggaaaagtcagctaccaatcttgcagtgggatcaggacaagataca
gagaaaaacaaaatattggcttttgtaaatgatgatatctgcagttctatattggatgta
tctttccagcgattactgaagaaggaaaaactcaatcctggaacatcgctttctgttggg
acattagagttgtggagtgatgattttgagggtaaaggagattttggccagtaccgttca
aggctgttggagttgatccgttttgttgcagctgtcaagcctatggtagctgctgctaaa
gtttgtgagagaagtatgactattattaagagtctcttccttgctccttatcctgctcag
gaattggttatacttgagagcatgcagttggctttagaaaatgttgtaaacgcagtgttt
gatggatcaagtgaaactgtaaggagcagttctgaagttcaacagtcattgtgcagaatg
tttgaaggtctgcttcaacaacttcttcctttgaaatggactgaaccggcgcttgtagaa
gttctcggtcattacttagacgcactaggaccctttctgaagtataatccagatgttgtt
ggcagtgtcgttaataagttgttcgagctactgacctcacaaccctttgttgtcaaggat
cctgctacaagtgcttctcgacatgcgagattacagatttgcacatcattcatccgaatt
gcaaaggctgcagaccagagcattttgcctcacatgaaaggaattgctgacactatggca
cttctacaaaaagatggtcgtctacttcgtggggagcacaatctcttgggtgaagcattc
ctcattatggcttctgctgccggagttcagcagcagctagaagttttggcctggttactt
gaaccattgagcaaacagtggacacagcttgactggcaagatacatatctctctgatcca
acaggtttgattcgactgtgtgctgatacaccatttatgtggtccattttccacacagtt
acgttctttgagaaggctcttaaacggagtggtctaaggaaaggcaatattagtgtacaa
gccatacctacatctgacagtttacacccaatggcatctcatgtctcgtggatgcttcct
cctcttcttaaactactccgtgccatacattctctttggtctccagctgttagtcaagca
ttacctggagagataaaagctgcaatggctatgagtgatgttgaaagggccagtcttttc
gggggaggtaatgttaaattgcctaaaggtactctaagttttactgatggatctccattc
gatatgaatagagaagcttatgcggagccaaatgaagctgatatccgcaactggctgaaa
ggtatcagagatagtgggtacaatgtactgggtttatcagcaaccattggggatcctttg
ttcaaatgcttagactctcagtctgttattatagccttgatggagaacatacaacatatg
gagttcaggcacttaaggctgcttgttcatttagtgttgatccccttgattaaaaattgc
ccttctgatatgtgggagtcatggctggaaaagctcttgcacccattacttgtccattct
cagcaagctcttagctattcgtggtctagtctcttacaggaaggtagagcaaaggttcct
gatctgcatggcttagtcgatggctcagacttgaaagtggaagtaatggaggaaaagctc
ctgcgagatctaactcgcgaaacgtgttcaatcctctcagtttttgcttcacccatactc
aatgctggacttccttcattggagtcatctggccatgtgagccgagtggatgagtcatca
cttaaagacttggctgcatttgccacaagctccatggttggatttgtattgatgcataaa
agcgtagcacttccagccttgcagatcagtttagaggctctaagatggacagatggtgaa
gctgtaactaaagtttcttcattttgtggagctgtaatcctcttggctatttcaacaact
aatatggagcttcgggacttcgtttgtaaagatctgttccctgcaacaatacaggctctg
gctctggagtcaaatgctttcatcagtgctgatttagttgcgctttgtcgtgagattttc
atttatcttgctgataaacacccagcaccgcgacagattttactatctctcccttgcatt
acatcccaagatctccttgcctttgaggaagcgttgaccaagactgctagtcctaaggag
cagaaacagcacatgaagagcttcctgatgttagcaacaggaaacaaattaaaagctctc
gctgcacaaaaaagcgttaatgtcatcacaaatgtttcaacaaaacctcgtaatgtaact
cctgctttggaatccaatatcgatgaaggagatgctattggattagcgggaatcgtgtaa
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integrated database retrieval system
