Solanum dulcamara (climbing nightshade): 129886365
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Entry
129886365 CDS
T09577
Name
(RefSeq) vacuolar protein sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129886365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdul04131
]
129886365
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sdul04147
]
129886365
Membrane trafficking [BR:
sdul04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
129886365
Exosome [BR:
sdul04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
129886365
Exosomal proteins of colorectal cancer cells
129886365
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Paralog
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
MKT1_C
Serglycin
HTH_10
PH_TFIIH
Motif
Other DBs
NCBI-GeneID:
129886365
NCBI-ProteinID:
XP_055816994
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Position
4:13165552..13173746
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AA seq
438 aa
AA seq
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MAGNWLPAAQLTGSGRPVLQPGEVECSLLSSVDLFSEETPSFPNLKSGLVILTTHRLLWV
QESTTSPTAIFIPLSAITLIFPVKKSIKSMFASPRFRFQASVDEKGTKGAVVITLILRGK
SDIDSFVEKFREAWRKKAWEDGEKSGSESSGSGLGSGHGSGADGGLAVRMPVVGVAGILR
KEQEMWENTDKSLQEAFQDLNALMNKAKEMVILAEKMRAKLLSGSTSQATGTNDEEIGTK
EEMQELLLSVGIVSPVTKESAGALYHQQLSRQLADFAKIPLERAGGMINLIDIYCLFNRA
RGTELISPDDLLRACSLWEKFDVPVMLRTFDSGVMVIQSKSHSDVEVFTRIRSMVTTPDA
LRSGVTASDAAMTLGIAPAMAKEHLLAAEGKGLLCRDVSPDGFRFFVNLLQEVDADDIFL
VKDYGIYQTWVKVISAAR
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggccggaaattggctaccggcggcacagctcaccgggagtgggcggccggttcttcaa
ccaggagaagtggagtgcagccttctctcctccgtagacctattttctgaagaaaccccc
agtttccctaaccttaaatccggcctcgttattctcacaactcatcgtcttctctgggtc
caagaatccactacctcccctactgccattttcatccccctttcagcaattaccctcatc
ttccctgtcaaaaaatccatcaagtcaatgttcgccagcccaagattccgatttcaggca
tcagttgatgaaaagggcacgaaaggggctgtggttattactttgattcttaggggaaaa
tcggatatagactccttcgtggagaagtttagggaagcatggagaaagaaggcttgggaa
gatggggaaaaatctgggtcggagtcttcaggttcagggttggggtcgggtcatggatcg
ggtgctgatggaggattggcggtgaggatgccggttgttggggtagctgggatattgagg
aaagagcaggaaatgtgggaaaatactgataagagcttgcaggaagcatttcaggatttg
aatgctctcatgaataaggctaaagaaatggtgattctagcagagaaaatgagagcaaag
cttctgtctggctcaactagtcaggccactggcacaaatgatgaggaaattggaaccaaa
gaagagatgcaagaactgctattaagtgttggtattgtgtctcctgttactaaagaatct
gctggtgcattgtatcatcaacaattatctcggcagttggcagattttgccaaaattcca
ctggagagagctggaggaatgattaatctcattgacatctattgccttttcaaccgggct
cgtggaacagaattgatctcacctgacgatttgctgcgtgcatgttctctctgggagaag
tttgacgtaccagttatgcttcggacgtttgatagtggtgtcatggtcatccagagcaaa
agccacagtgatgttgaggtatttactagaattagatctatggttactacacctgatgct
ttacgatcaggggtcactgctagtgatgctgcaatgactctgggaattgctccagcaatg
gctaaagagcaccttctcgcagctgagggcaaaggacttctatgcagagatgttagtcca
gatggattccgctttttcgtcaatttgttgcaagaagttgatgctgatgatatattctta
gtgaaagattatggaatctatcagacatgggtcaaagttatctctgccgccaggtga
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