Solanum dulcamara (climbing nightshade): 129886378
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Entry
129886378 CDS
T09577
Name
(RefSeq) protein argonaute 4A-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdul03019
]
129886378
03036 Chromosome and associated proteins [BR:
sdul03036
]
129886378
Messenger RNA biogenesis [BR:
sdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
129886378
Chromosome and associated proteins [BR:
sdul03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
129886378
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
129886378
microRNA pathway
RISC loading complex
129886378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
129886378
NCBI-ProteinID:
XP_055817008
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All DBs
Position
4:complement(13329958..13340172)
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AA seq
880 aa
AA seq
DB search
MVSSKDEGTTTKSNRVPMARQGTGSKGQKIRLLTNHFKVGMNNSDGHFFHYSVALNYEDG
NPIEVKGIGRKILDKVHQTYAMELAGKDFAYDGEKSLFTIGELPGKKFEFDVVLEDISSS
RTTRGSPGGSPSDVDRKRSKKQPWSKAYKVVIKYAAKIPMQAIANALRGQDSEKYQEAVR
VLDIILRQHAAKRGCLIVRQSFFHNEARNFVDLGGGVSGCRGFHASFRATQGGLSLNMDV
STTMIVKPGAVIDFLLANQNARDPYQIDWSKAKRMLKSLRIKASPSNREYKITGLTDKPC
KEQTFTLKQKNGNGGVQEVETTVYEYFTHHRRIPLQYSGDFPCINVGKPKHPTFIPLELC
SLVSLQRYTKALSNLQRASLVEKSRQKPQERMRTLTDALKTSNYKADSLLGSAGISISDQ
FTQVEGRVLPAPKLRVGDEQDLFPRNGRWNFNQKQLVEPVKLERWAAVNFSARCDVRKLC
MDLQRCGKMKGILINPPYDIFEENQQFRRNPAPVRVEKMLEALKSKLPAPPQFLLCILPE
RKNSDLYGPWKRRNLADLGVVTQCIAPTKINDQYLTNVLLKINAKLGGMNSFLTTELVPT
LPQISRVPTIIIGMDVSHGSPGRSDAPSIAAVVSSRQWPLISRYRAAVCTQSPKLEMMDS
LYKKISDTEDVGLFRELLRDFYSSSKNVKPEHIIIFRDGVSESQFNQVINIELNQIIEAC
NHLEEDWSPKFTVIVAQKNHHTRFFQTNSPDNVPPGTVIDNGICHPKTNDFYMCAHAGPI
GTTRPTHYHILHDEIGFSADDMQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVAQFI
KFDELSETSSSHGGVATSGSVPVPPLPRLHKNVRSSMFFC
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggtatcttcaaaagatgaaggtacaacaacaaaatcaaaccgtgttcctatggctcga
caaggaactgggtcaaaaggacaaaagattcgcctactcaccaaccatttcaaagtaggg
atgaacaactctgatgggcacttcttccactatagtgttgctctaaattatgaagatgga
aaccccatagaggtgaaaggaattggacgaaaaatccttgacaaggtccaccaaacatat
gcaatggagctagctggcaaagactttgcttatgatggggagaagagcttgttcactatt
ggtgaactgcccgggaagaagtttgagtttgatgttgtcctggaggatatttcttcatcc
agaaccactcgaggcagccctggagggagtcccagtgatgttgataggaaaagatcaaag
aagcagccatggtcaaaggcatacaaagtggtaattaagtatgctgcaaaaataccaatg
caagccattgcaaatgcactccggggacaagattctgaaaagtatcaagaggcagtgaga
gtgcttgacataattctgaggcagcatgctgccaaacggggctgccttattgtgcgccaa
tctttttttcacaatgaggctagaaactttgttgatcttggtggaggagtttcaggatgc
cgaggtttccatgcaagcttccgggccacgcaaggaggcctttcattgaacatggatgtg
tcaaccacaatgattgttaagccaggggcagtgatagatttccttcttgcaaaccaaaat
gcaagagatccttatcagattgattggtccaaggcaaagaggatgctgaagagtctgagg
atcaaggccagcccctcaaatagggaatacaaaatcaccggtctcactgataagccttgc
aaagagcagaccttcactttgaagcagaaaaatgggaatgggggagtgcaagaggttgag
acgactgtttatgagtatttcactcatcatcgccgtattcctttacaatattctggagat
tttccttgcattaacgttgggaaaccgaaacatccaacatttattcctcttgagctttgc
tctctggtgtctctgcagcgctacaccaaggccctgtccaatctacaaagggcttccctt
gtagaaaaatcccgacaaaagccccaagaaaggatgagaacattgacagatgctctaaag
accagcaactataaggctgactctcttcttggatctgctggaatttcaattagtgatcag
tttactcaagttgaaggtcgagtcttgccagctccaaagttgagggtaggggatgaacaa
gacttgtttcctagaaatggaaggtggaattttaaccagaagcaattggttgaaccggtc
aaacttgagcgttgggcagctgtgaacttttctgcccgttgtgatgtccgtaagctttgt
atggatctacaaaggtgtgggaaaatgaaaggaattttaatcaatccaccatatgatatc
tttgaggagaatcagcagttcaggcgtaaccctgctcctgtgagagttgagaagatgtta
gaagcactgaaatcaaaacttccagctccacctcagttccttctatgcattctgccagag
agaaagaactctgacctttatggcccctggaagagaaggaatttagctgatcttggagtt
gttacacaatgcattgctcctacaaagatcaatgatcagtaccttaccaatgtgctcttg
aaaatcaatgcaaagctgggcggcatgaattcctttctgaccacggagcttgtccctaca
ctacctcagatttcccgagtccccactatcattattgggatggatgtctctcatggctca
cctggacgatcagatgctccctccattgcagcggtggtcagctctagacaatggcccttg
atttcacggtatcgagcagctgtttgtacacagtcaccaaagcttgaaatgatggattct
ctgtacaagaaaatatcggacaccgaagatgtgggccttttcagggagctgctgagggat
ttttactcaagttctaaaaatgtgaaacctgagcacatcatcattttcagagatggagtt
agtgagtctcagttcaaccaagtcattaacattgagctcaatcagattatcgaggcttgc
aatcatctggaagaagattggtctccaaagttcactgtcattgtagcacaaaagaaccac
cacacaagatttttccagactaactcaccagataatgttcctcctgggactgtgattgac
aatggaatttgccatccaaagaccaatgacttctacatgtgtgctcatgctgggcctatt
ggaacaacaagacctacacactaccatattctgcatgatgaaattggtttctcagcagat
gacatgcaagagctggtccattcactgtcttatgtgtatcagagaagtaccacagccatc
tctgttgttgcacctatatgttatgcccacttggcagcagcacaggtggcacagtttatc
aagtttgatgaactgtcagagacttcctcaagccacggtggagttgcaacatctggtagt
gttccagtccctccattgcctcggcttcacaagaatgttcgcagttcaatgttcttctgc
taa
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