KEGG   Solanum dulcamara (climbing nightshade): 129886437
Entry
129886437         CDS       T09577                                 
Name
(RefSeq) uncharacterized protein LOC129886437 isoform X1
  KO
K24155  rabconnectin-3a
Organism
sdul  Solanum dulcamara (climbing nightshade)
Pathway
sdul04142  Lysosome
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    129886437
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sdul04131]
    129886437
Membrane trafficking [BR:sdul04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    129886437
 Endosome - Lysosome transport
  Acidification regulators
   Rabconnectin-3 complex
    129886437
   RAVE complex
    129886437
SSDB
Motif
Pfam: Rav1p_C WD40_Prp19 WD40_WDHD1_1st WD40 WDR55 Beta-prop_EML Beta-prop_EML_2 Beta-prop_IFT140_1st WD40_CDC20-Fz ANAPC4_WD40 EIF3I Beta-prop_TEP1_C
Other DBs
NCBI-GeneID: 129886437
NCBI-ProteinID: XP_055817096
LinkDB
Position
4:13990625..14017329
AA seq 2515 aa
MESHKISCCTTVDDVVSKLPLQLIKSEIIPPVPNRSKYPSEFEPAIDWQPNFAGYSWIAY
GASSLLVIRQFPNPLSQTETVIGTVFRQVLELSIDGTGTVSAVAWSPVTPSSGDLAAALD
NCIGLFSYNSDASHSSFCWSQTSTLVQSTKVDSITWTGSGDGIISGGIELILWRKTERSW
EIAWRFKPELPQTLISATWSIEGPFAAAPPYGLHFEGSGSHIHAGNKCVLVCQRDADSRH
LEAMLPHPLPVSMIQWRPSTVTQSTRDGRYSRRLVLLTCCLDGAIRLWTEIDDGRVRKVG
KDGNEHKMTKSSFRVVAVVEVNQALNGRLGLDVYVRWAKDISGIITVNGEAVSYASSDEH
QHGNAGRCEWLVAVGPQTTLTFWAIHCLDDFSPARAPRVTLWKRKELNSPKEMPRGLLLN
KVFIMRNQVFGPPTVCSFINLLPSNYLAWMQFYSTKFPSGANVSSELISTEDSTPTKCQT
EGLLSLCATGLSNTDSHSNKILQVAVHPCLSELEIASSLDTDGKLLFWLFSSASNTILAL
PTLSPSWKLFGKSATALPQPKYTSLSWAPTLLSEERILVIGHADGIDFLVVKAVKTEELE
MVCHKICTIPLTAGSQEQGPDSVFSIPLPSTCNKTFISNSFLLLAVWKKGFQALSWKIYL
HHYDLSGSCCGCSFDSNNTFQNNIWKFESSYSGKAYIVSVEPCSSVFPDPHHRDKISSYA
VICPTNSGFSEEIFANNLCSNYFAYHMVTGCVDGSLHLWRSVPALSSNSQWDLVGMVAMH
QSPISAMSVSFCGRKIATISKEGPLSTSTTIHIWECVRVEGAGSFILEDTLYFDADVVAS
NWLTIGNGQFLLGVCSRDKLNVYAQKRCGGQCNLELETSLEENIWVCIAASYTNPTIQDF
FWGPKAMIVVVHDQYISVFSKFSYFMDKKLLPQLGGEFCEESSACHYGSNKVPVFYGHEN
CDNARCQSDFQLKMEVVNETSLFSSMTKSKEGFTSVKNGIWSILEIAELVGGSLPLVHPE
AFLVNLLSGNWKRSYVALQCLSKHVTSTKLSTKICCLRAFSDLIFPISLSNYLEGNVLLS
SGEKSFQWGGPSDSSSWGYASSDNAFSISSARSEITDFIEAVDKLQNLATISATEIMQMR
AAVHLLDEVSNMQSTSAYNSLDGPGRRFWVSVRFQQLYFVQRFGRLPSEGELVVYSGLIG
WAFHSDCQDNLFDSLLSKQPTWQEMRDMGVGLWYTSVAQLRLKMEKLARQQYLKNKDPKA
CALLYIALNRLQVLAGLFKISKDEKDKPLVAFLSRNFQEDKNKAAALKNAFVLLGKHQLE
LAIAFFLLGGDTTSAVTVCAKNLGDEQLALVICRLVEGYGGKLELNLISKFLLPSSLAKG
DYWLASVLEWMLGKYSQAYLRMLAYPMGSLNSKWIVSSRQPAFIDPNIGDFCLMLAAKTT
MKNAIGEQNAASLSRWAILMRATALSRCGLPLEALECLSSSVSATGDSNRRNVPDNMDSG
CLHEMLSAMLNENSSNWLSLDVAFQIDSHMRSDLSMQYMSKMLRRHPSWVDNHTTCLQEH
MYTVSENQEYKLLLEAFQDELMTTISSFQLKFSLSPLHCIYSICLSFCNHGLAYVGCHLL
RDYINRYLSSEQGGGLDGCSLYPCLPDLFLEVSAELFYIFARYIIMCSMDCFYLKSFTFR
SNRADENIYCAILELYKRRLCWSFWCLRAMMQYSSVSCTENVVGTHFTVLDLSEYLLLFA
SAWVQRNFSDLILIMKPLLMAKTSDETDIKDIQKLLRESLEMMASDLPIHAAGSSVQNKN
QMPQAQFGDLILSAPQERWHVMVAFFWGYVSSLLKHKLDLLCPELKESGLFLPPGGHPSI
STSSIFVNANNVSTHNGMVPGLLANILKVTCAHISSYCVNQFASVLLESIDPGATTLFCF
EDHQSHHKAPDTKLSPSNSDLDKVTGEDELSVFEVLWDFCSELKKVNQDFVLQDQKCLQH
TLQKSFKGWSEMYPSIVRECEVDETYDREERLGSPSSTAGSPLACLSPNNHPFQSFGGKD
THHAKKVLPFRSPIEIYKRNGELLEALCINSIDQHEAALASNRKGLLFFKWEDGLPCGNK
ADNVWAEADWPHNGWAGSESTPVPTCVSPGVGLGSKKGTHLGLGGATVGTGFMARPTFGL
PGYANMGGSSLGWGVQEDFDEFLDPPATVENVRTRSFSTHPSRPFFLVGSSNTHIYLWEF
GKDRATATYGVLPAANVPPPYALASVSAVKFDHCGHRFVSAASDGTVCTWQLEVGGRSNV
QPTESSLCFNNYTSDVTYVTSSGSIIAAAGYSSSGVNVVIWDTLAPPATSRASIMCHEGG
ARALAVFDNDLGSGSISPLIVTGGKGGDVGLHDFRYIATGKTKRQKHTEIGDHGVNSMVD
TQKKTGDQNRNGMLWYIQKAHAGSVTKISTIPHTSFFLTGSKDGDVKLWDAKNAKLVFHW
PKLHERHTFLQPSSRGFGGVVQAAVTDIQIVSHGFLSCGGDGAVKFVMLNDHLSL
NT seq 7548 nt   +upstreamnt  +downstreamnt
atggagagtcacaaaatcagttgctgtaccacagtggacgacgtcgtttcgaagttacca
cttcagctgatcaaatcggagatcatccctccggtaccgaaccgatcaaaatatccttcc
gaattcgagccagcaattgactggcagccgaacttcgctggctactcatggatcgcctat
ggtgcctcgtctctcctcgtcatacgtcaattccccaaccctctatcacaaaccgagact
gtaatcggcacagtttttcggcaggttctcgagctgtcaatcgatggcactggcactgtt
tccgccgtcgcttggtccccggtaacgccttcttctggagacctcgctgctgcactcgat
aactgcattggattgttctcttacaactctgacgcttctcatagttctttttgttggagc
cagacatcaacgctagtacaatccacaaaggtagactcaatcacatggacggggtcagga
gatgggataatttcaggtggcattgaattgatcttatggagaaagacagagaggtcatgg
gaaatagcttggagatttaaaccagaactgcctcagactctaatttctgctacttggtca
attgaagggccttttgctgctgcacctccatatggattgcactttgaaggttcgggttcc
catatccatgctggaaacaaatgtgttttggtatgccaaagagatgctgattccagacat
ttagaagctatgctgccacacccattacctgtttctatgattcagtggagaccatctaca
gttacacagtcaactagagatggcagatattcaaggaggttggtgttattaacatgctgt
ctagatggagctataaggctctggactgagattgatgatgggagggttagaaaagttggc
aaggatggtaatgaacacaaaatgactaaatcctcttttcgtgttgtcgctgtagttgag
gtaaaccaagcattaaatggaaggctagggttggatgtatatgtaagatgggcaaaagat
attagtggtataataactgttaatggggaagctgtgtcttatgcttcatcagatgaacat
caacatggcaatgctggtaggtgcgaatggttagttgctgtaggtccccaaacaacactg
actttttgggctattcattgtctcgatgatttttctcccgcaagagccccaagggtaacg
ttgtggaaaagaaaagaattgaacagtcctaaagagatgccaaggggattgctcttaaat
aaagtctttatcatgagaaatcaggtctttggtccaccaacggtatgttcttttattaat
ctattaccaagtaactatctagcctggatgcaattttattccacaaaattccccagcggt
gcaaatgtatcttcagaactgattagcacagaagattcaactccaactaaatgtcagact
gaaggtttattatcattatgtgcaacgggactttcaaatacggacagtcacagcaataaa
attctgcaggtagcagttcatccttgtttgtctgagttggaaattgcttcctctctggac
actgatggaaagctccttttttggttgttttcttctgcttcaaatactattttggccctc
ccaactttgagtccatcttggaaactttttgggaaaagtgctactgcactccctcaaccc
aagtatacaagcttaagctgggctcctactctgttaagtgaagaacgaattctcgtgatt
gggcatgcagatggaatagatttcttagtagttaaggctgtgaaaactgaggaattggaa
atggtttgtcacaaaatatgtactataccacttactgctggaagtcaagaacaggggccg
gacagcgtcttctcaattcctttgccttccacttgtaacaaaaccttcatttccaatagc
tttttgctgttagctgtgtggaagaaaggctttcaggctttatcgtggaaaatttacctt
catcactatgatttgtctggaagttgctgtgggtgcagttttgacagtaataacaccttc
cagaacaatatatggaaatttgagagtagttattctggcaaggcatacattgtctctgtt
gaaccttgttcatcagtttttccagaccctcatcaccgtgataaaatttcaagttatgct
gtgatctgtcccacaaactctggattcagtgaagagatttttgctaataatttgtgtagc
aattactttgcttatcatatggttactggttgtgttgatggtagtttgcatttatggaga
agcgtgcctgctctgagctcgaattctcagtgggatcttgttggtatggttgctatgcat
caaagccctatttcggctatgtctgtaagtttctgtggccgaaagattgcaactatctcg
aaagaaggtccattaagtacttctactactattcatatctgggaatgtgtgcgtgttgag
ggtgctggcagctttatactagaagacactttgtattttgatgcagatgttgtcgcttca
aattggttgacgattgggaatggccagtttttactaggtgtttgctcaagagataagttg
aatgtgtatgctcaaaagagatgtggaggtcagtgcaatttggaactggaaacatcatta
gaagaaaacatttgggtgtgtattgcagcaagttatactaatccaaccattcaggacttc
ttttggggacccaaagccatgatagtggttgttcacgatcaatacatttctgtctttagc
aagttctcatattttatggacaagaaacttctgccgcagcttggtggagaattttgcgag
gagagttccgcctgtcactatggttctaataaagtgccagtattctatggtcatgaaaat
tgtgacaatgcacggtgtcagtctgatttccagttgaaaatggaagtggtgaatgagact
tcactgtttagtagtatgacaaaatctaaagaaggctttacgtctgttaaaaatgggatt
tggagcattttagagatagcagaacttgtaggaggatctcttcctcttgttcacccagag
gcatttcttgttaacttactttcaggtaattggaaacgttcatatgtagctctgcagtgc
ctcagtaaacatgtaacttccacaaagttatccacgaaaatatgctgccttcgtgccttc
agtgatttaatatttcccatttcgttgtcaaactatctggaaggaaatgttttgttaagt
tctggtgagaagtcatttcaatggggtggaccttcagattcctcaagctggggatatgct
tcatctgataatgcgttctctatctcttcagcaagatctgaaataactgactttatagaa
gccgttgataaacttcagaatttggcaactatatctgccactgaaataatgcaaatgcgt
gctgctgttcatcttctcgatgaagttagcaatatgcagtccacttctgcttataatagc
cttgatggacctggtcgtaggttttgggtttcagtgaggtttcaacagctatattttgtt
caaagatttggcagactgccatcagaaggtgagctggttgtgtactcgggactaattgga
tgggctttccactctgactgccaagataatttgtttgattctctattatctaagcaaccg
acttggcaagaaatgcgtgatatgggtgttggactatggtatacaagtgtagcacaactg
cgactgaagatggaaaagctggcaagacaacaatatttaaagaataaagatcccaaggca
tgtgcacttctttatattgctttaaatagacttcaagtattggcgggcctttttaagatt
agcaaagatgagaaagataagccattggtggcatttctttcacgcaattttcaggaagat
aaaaataaggctgctgctctaaagaatgccttcgtcttactggggaaacatcagttggag
ctcgcgattgctttctttttgcttggaggagatacaacatctgctgtcactgtttgtgca
aagaatctcggggatgagcagcttgctcttgttatttgccgtcttgttgaaggttacggt
ggaaaattagagcttaatcttatttcgaaattcctcctcccgtcttctcttgccaaaggt
gactactggcttgcaagtgttctggagtggatgttggggaagtattcacaggcttatctt
agaatgcttgcttacccaatggggtctttgaatagtaaatggatagtctcatcccgtcaa
cctgccttcatagatccaaacattggagacttttgcctaatgttagcagccaagactacc
atgaagaatgctattggggagcaaaatgctgcttccttgagtagatgggcgatcttgatg
agggccactgccttaagcagatgcggactgcctcttgaagctttggaatgcctttcatct
tctgtgagcgccactggtgattcaaatcgacgaaatgtgcctgataatatggactctgga
tgcctgcatgaaatgctgagtgcaatgctaaatgaaaattcatcaaattggctatcattg
gatgtggcttttcagatagattcacatatgagatcagatttgtctatgcaatacatgtct
aagatgttaagaagacatccaagttgggtagacaatcatacgacatgtcttcaggagcac
atgtatactgtatctgagaatcaagaatacaagcttttacttgaagcttttcaagatgaa
ttgatgactacaatttcatcctttcaactgaagttctccttaagtcctctgcattgtatt
tactcgatctgtttgtcattttgcaaccacggtttggcgtatgtaggatgccacttgttg
cgagactacataaatagatatctgtcaagtgagcaagggggtggacttgatggttgctcg
ttgtatccttgcctcccagatctatttcttgaagtatctgcagaactattttatattttt
gcaagatacatcattatgtgtagcatggactgtttctacttgaagtcattcacctttagg
agtaatagagctgatgaaaacatctattgtgccattctagagctgtacaagaggagatta
tgttggtcattctggtgtcttagagccatgatgcagtactcttctgtttcttgtacagaa
aatgttgtagggacacattttactgtccttgatttgtcagagtatcttttactgtttgca
tctgcttgggtacaaaggaattttagtgatcttatcttgattatgaaacctctcttgatg
gcaaaaacttcagatgagacagacataaaggacatacagaaacttcttcgtgagtctctc
gaaatgatggcttctgatttacctattcatgctgctggatcttctgttcagaacaagaat
caaatgccacaagcacaatttggggatctcatattgtcagctccgcaagagagatggcat
gtcatggttgctttcttttggggatatgtatctagtcttttaaaacacaagttagatctg
ttatgtccggaacttaaagaaagtggtttgtttctacctccaggcggacatcccagtata
tctacttcttcaattttcgtaaatgccaacaatgtctctacccataatgggatggttcca
ggacttctggctaacatactaaaggttacatgcgctcacatctcttcttattgtgtgaat
cagtttgcatctgtcctgctggagagcatagatccaggtgcaactacacttttctgtttt
gaagatcatcagtcccatcataaagccccagatactaaacttagtcctagcaatagtgat
ctagataaggtgactggtgaagatgaattatcagtgtttgaggtgttatgggatttttgt
tctgagcttaagaaagttaatcaggattttgtgcttcaagaccagaaatgtttacagcat
accttgcaaaagtcctttaaaggatggagtgaaatgtaccccagcattgtgagggagtgt
gaagttgacgaaacttatgacagagaagaaaggcttggtagtccaagtagcacagctgga
tctcctcttgcttgtttgtcgccaaataatcatccttttcaaagttttgggggaaaagat
actcaccatgcaaaaaaggttttgccattccgtagtccgatagagatatataaaagaaat
ggagagcttttggaggctttgtgcatcaactccattgatcaacatgaagctgctcttgct
agcaatcggaagggtttattattcttcaaatgggaagatggtcttccttgtggaaataaa
gctgacaatgtctgggcagaggctgactggccacataatggttgggcgggatccgagtct
acaccagttcccacttgcgtctctcctggagtgggtctagggagtaagaagggtacacac
ctcgggttaggtggagcaactgttggcacaggttttatggcaagacctacatttgggctt
ccaggttatgccaatatgggtggatcgagtcttggctggggggttcaagaggattttgat
gagtttcttgaccctcctgccacagtagaaaatgttcggacaaggtcattctcgactcac
ccttcaaggccttttttcttggttggatcaagcaatacacacatatatttgtgggagttt
ggcaaagatagagctactgctacatatggagtgcttcccgctgcaaatgtccctccccca
tatgctcttgcctcggtgtctgccgtgaagtttgatcattgtggtcacagatttgtctct
gctgcatcagatggtactgtgtgcacgtggcagcttgaagtaggaggaaggagtaatgtt
cagccaacagaatcctctctttgctttaataattatacttcggatgtcacatatgttact
tcgagtggttcaatcatagctgccgcagggtatagctccagtggcgttaatgttgtcata
tgggatacacttgctccaccagcaacgtctcgtgcctccataatgtgtcatgaaggaggt
gcacgtgctcttgcagtgtttgataatgatttaggaagtggttctatctctccactcatt
gtaacgggtgggaaaggtggtgatgttggacttcatgacttccggtatatagctactgga
aagacaaaaagacagaagcatacagaaattggtgaccatggtgtgaattccatggttgac
acgcagaagaaaaccggtgatcagaatcgtaatgggatgctatggtatattcagaaggct
cacgcagggagtgttaccaaaatatctaccataccacataccagctttttcttgacggga
agtaaagatggagatgtaaaactttgggatgccaaaaatgcaaaactagtatttcattgg
ccaaaattgcatgaaaggcacaccttcttgcagccaagctcccgcggctttggtggtgtg
gttcaggcagctgttacagatattcaaattgtttcccatggttttctttcttgtggtgga
gatggtgctgtaaagtttgtgatgctcaatgatcatttaagtctgtga

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